Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   N6G78_RS00220 Genome accession   NZ_CP104855
Coordinates   41105..41932 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain TY-1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36105..46932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N6G78_RS00195 (N6G78_00195) efpO 37168..38610 (+) 1443 WP_046340193.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  N6G78_RS00200 (N6G78_00200) tmk 38607..39245 (+) 639 WP_003243137.1 dTMP kinase -
  N6G78_RS00205 (N6G78_00205) darA 39319..39648 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  N6G78_RS00210 (N6G78_00210) yaaR 39661..40101 (+) 441 WP_015382556.1 YaaR family protein -
  N6G78_RS00215 (N6G78_00215) holB 40113..41102 (+) 990 WP_015482689.1 DNA polymerase III subunit delta' -
  N6G78_RS00220 (N6G78_00220) yaaT 41105..41932 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  N6G78_RS00225 (N6G78_00225) yabA 41947..42306 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  N6G78_RS00230 (N6G78_00230) trmNF 42365..43108 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  N6G78_RS00235 (N6G78_00235) yazA 43095..43394 (+) 300 WP_014475567.1 GIY-YIG nuclease family protein -
  N6G78_RS00240 (N6G78_00240) rsmI 43369..44247 (+) 879 WP_041517603.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  N6G78_RS00245 (N6G78_00245) abrB 44296..44586 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=633710 N6G78_RS00220 WP_003226767.1 41105..41932(+) (yaaT) [Bacillus subtilis strain TY-1]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=633710 N6G78_RS00220 WP_003226767.1 41105..41932(+) (yaaT) [Bacillus subtilis strain TY-1]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTCAGAGAGCTTGTAAAGGATTTGG
CATCTATCTTTAAGACAAGGATTGAGCTGCGCCAAATAGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996