Detailed information NTG0633697

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N6H16_RS22160
• Genome accession: NZ_CP104851
• Coordinates: 4594479..4595504 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GYX208DH4E-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4589479..4600504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N6H16_RS22150 (N6H16_22080)	rpmE	4591710..4591922 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
N6H16_RS22155 (N6H16_22085)	priA	4592125..4594323 (+)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
N6H16_RS22160 (N6H16_22090)	cytR	4594479..4595504 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
N6H16_RS22165 (N6H16_22095)	ftsN	4595596..4596555 (+)	960	WP_000068837.1	cell division protein FtsN	-
N6H16_RS22170 (N6H16_22100)	hslV	4596648..4597178 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N6H16_RS22175 (N6H16_22105)	hslU	4597188..4598519 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
N6H16_RS22180 (N6H16_22110)	menA	4598586..4599512 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N6H16_RS22185 (N6H16_22115)	rraA	4599605..4600090 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N6H16_RS22190 (N6H16_22120)	zapB	4600175..4600420 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=633697 N6H16_RS22160 WP_000644904.1 4594479..4595504(+) (cytR) [Escherichia coli strain GYX208DH4E-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=633697 N6H16_RS22160 WP_000644904.1 4594479..4595504(+) (cytR) [Escherichia coli strain GYX208DH4E-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628