Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   KDJ21_RS10220 Genome accession   NZ_CP088268
Coordinates   2117752..2118891 (+) Length   379 a.a.
NCBI ID   WP_232273824.1    Uniprot ID   -
Organism   Metabacillus litoralis strain NCTR108     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2112752..2123891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KDJ21_RS10195 (KDJ21_010195) - 2113558..2114565 (+) 1008 WP_332328022.1 EAL and HDOD domain-containing protein -
  KDJ21_RS10200 (KDJ21_010200) - 2114741..2114965 (+) 225 WP_212137676.1 hypothetical protein -
  KDJ21_RS10205 (KDJ21_010205) - 2115358..2115498 (+) 141 WP_098795571.1 DegQ family regulator -
  KDJ21_RS10210 (KDJ21_010210) - 2115642..2116544 (+) 903 WP_212137678.1 polyprenyl synthetase family protein -
  KDJ21_RS10215 (KDJ21_010215) - 2116711..2117301 (+) 591 WP_420063847.1 PDZ domain-containing protein -
  KDJ21_RS10220 (KDJ21_010220) comP 2117752..2118891 (+) 1140 WP_232273824.1 sensor histidine kinase Regulator
  KDJ21_RS10225 (KDJ21_010225) ltrA 2119440..2120543 (+) 1104 WP_232273750.1 group II intron reverse transcriptase/maturase -
  KDJ21_RS27020 (KDJ21_010230) - 2120561..2120740 (+) 180 WP_232273328.1 hypothetical protein -
  KDJ21_RS10235 (KDJ21_010235) - 2121318..2121710 (+) 393 WP_180320394.1 hotdog fold thioesterase -
  KDJ21_RS10240 (KDJ21_010240) mnhG 2121814..2122170 (-) 357 WP_212137682.1 monovalent cation/H(+) antiporter subunit G -
  KDJ21_RS10245 (KDJ21_010245) - 2122154..2122438 (-) 285 WP_121663279.1 Na(+)/H(+) antiporter subunit F1 -
  KDJ21_RS10250 (KDJ21_010250) - 2122438..2122914 (-) 477 WP_121663278.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 43738.50 Da        Isoelectric Point: 5.7555

>NTDB_id=633626 KDJ21_RS10220 WP_232273824.1 2117752..2118891(+) (comP) [Metabacillus litoralis strain NCTR108]
MKEVLDDRFRLKRISEKYNYQDSIFKYTQSIRKASNLEQVIAQLKQVIVDVLHVSKAYFIELDKVKNIASVDPLAKESNY
RAYLKEIKEASNEVGKIVEVDKGFVINIGVTDNKSYVLVCLSILNTPKLTRDEVSWLKTLSFYTNVSLENFLKIDELMQH
LQKVETEEGKPDWLNKILFSIEEKQRSHLAKEIHDSVLQDLVSLKRQCELAMLEEDAEVLKKQLQSINSSMTKVIKETRE
TCQELRPQLLYDLGLVKALNKLIMQYQDIVDFDIRLNTGNINVALDIDTQLNLYRIIQELLINAHKHSEATNVMIILVCI
KDKIVLHYEDNGIGFNYEEIADQKERTGLSGISERVKALKGSFLIETSRENGLKIDIEI

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=633626 KDJ21_RS10220 WP_232273824.1 2117752..2118891(+) (comP) [Metabacillus litoralis strain NCTR108]
GTGAAGGAAGTTTTAGATGATCGCTTTAGGTTAAAGAGGATATCTGAAAAGTATAATTATCAGGACAGTATTTTTAAGTA
TACTCAAAGCATACGAAAAGCAAGTAATTTGGAACAGGTTATTGCACAATTAAAGCAAGTAATTGTAGATGTACTCCATG
TTAGCAAGGCATATTTTATCGAGCTTGATAAGGTAAAGAATATTGCTTCTGTTGATCCCTTAGCAAAGGAATCAAATTAT
AGAGCTTATTTAAAGGAAATTAAAGAAGCTTCAAATGAAGTTGGTAAGATTGTTGAAGTAGATAAAGGTTTTGTTATTAA
TATAGGTGTAACTGATAACAAGAGTTATGTATTAGTATGCTTGTCTATACTGAACACACCTAAATTAACTCGTGATGAGG
TGTCATGGTTAAAAACTCTCTCGTTTTACACAAATGTTTCATTAGAAAACTTTTTGAAAATTGATGAACTAATGCAACAC
TTACAAAAAGTTGAGACAGAGGAAGGAAAACCAGATTGGCTGAATAAGATTTTGTTTTCTATAGAAGAAAAGCAACGATC
TCATTTAGCTAAGGAAATACATGACTCTGTTCTTCAGGACTTAGTTTCTTTGAAACGGCAATGTGAATTGGCAATGTTAG
AAGAGGATGCTGAAGTTCTTAAAAAACAGCTACAAAGCATAAACAGCAGTATGACGAAGGTCATTAAAGAAACAAGAGAA
ACATGCCAGGAACTGCGACCACAGTTGCTTTATGATTTAGGCTTAGTTAAGGCATTAAACAAGCTCATTATGCAATATCA
GGACATTGTGGATTTTGATATCCGACTTAACACTGGGAATATAAATGTCGCTTTGGATATTGATACCCAATTAAACCTTT
ATCGAATTATACAGGAATTGCTTATAAATGCTCATAAACATTCAGAAGCAACAAATGTTATGATTATTCTTGTTTGTATA
AAAGATAAGATCGTTCTCCATTACGAGGACAATGGTATTGGTTTTAACTATGAAGAAATAGCTGACCAAAAGGAAAGAAC
AGGCCTTTCTGGTATTAGTGAACGTGTTAAAGCTTTAAAAGGATCTTTCTTAATTGAAACATCAAGGGAAAATGGATTGA
AAATAGATATTGAAATATAG

Domains


Predicted by InterproScan.

(186-250)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.99

100

0.567