Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KDJ21_RS01915 Genome accession   NZ_CP088268
Coordinates   373197..373994 (-) Length   265 a.a.
NCBI ID   WP_121664475.1    Uniprot ID   -
Organism   Metabacillus litoralis strain NCTR108     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 368197..378994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KDJ21_RS01875 (KDJ21_001875) - 368446..368646 (-) 201 WP_121664482.1 gamma-type small acid-soluble spore protein -
  KDJ21_RS01880 (KDJ21_001880) fabL 368768..369523 (-) 756 WP_121664481.1 enoyl-[acyl-carrier-protein] reductase FabL -
  KDJ21_RS01885 (KDJ21_001885) - 369652..369876 (+) 225 WP_098798584.1 hypothetical protein -
  KDJ21_RS01890 (KDJ21_001890) mutY 369893..370993 (-) 1101 WP_212138742.1 A/G-specific adenine glycosylase -
  KDJ21_RS01895 (KDJ21_001895) - 371231..372211 (+) 981 WP_121664479.1 metal-dependent hydrolase -
  KDJ21_RS01900 (KDJ21_001900) - 372264..372533 (-) 270 WP_121664478.1 YfhJ family protein -
  KDJ21_RS01905 (KDJ21_001905) - 372641..372805 (+) 165 WP_121664477.1 small, acid-soluble spore protein K -
  KDJ21_RS01910 (KDJ21_001910) - 372858..373175 (-) 318 WP_396653938.1 YfhH family protein -
  KDJ21_RS01915 (KDJ21_001915) recX 373197..373994 (-) 798 WP_121664475.1 recombination regulator RecX Regulator
  KDJ21_RS01920 (KDJ21_001920) - 374111..375013 (+) 903 WP_212138740.1 TIGR01777 family oxidoreductase -
  KDJ21_RS01925 (KDJ21_001925) - 375081..376208 (+) 1128 WP_121664473.1 amidohydrolase -
  KDJ21_RS01930 (KDJ21_001930) - 376741..377298 (+) 558 WP_121664472.1 GNAT family N-acetyltransferase -
  KDJ21_RS01935 (KDJ21_001935) - 377421..377549 (+) 129 WP_098798575.1 YfhE family protein -
  KDJ21_RS01940 (KDJ21_001940) - 377626..377820 (+) 195 WP_121664471.1 YfhD family protein -
  KDJ21_RS01945 (KDJ21_001945) - 378100..378621 (+) 522 Protein_377 N-acetylmuramoyl-L-alanine amidase family protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31239.56 Da        Isoelectric Point: 5.9588

>NTDB_id=633606 KDJ21_RS01915 WP_121664475.1 373197..373994(-) (recX) [Metabacillus litoralis strain NCTR108]
MAIITKITTQKQSDERYNIFLDDGTGEKYAFSVDQDILIKHNLQKGKELDEFDIVEIKYGDDRKKAYNKALEFLSYRMRS
VKEVEDHLAKKEYHESVIKEVIAKLKEFNYVDDFEFALAYVRTQKQTNGKGPTVLTRELAMKGIGQSIVEQVLEEYNQDE
QIEEAVAHAEKLLKKNNKLSTIQLKQKIEQHLLRKGFSYNIISTALEEVDYEQDESEEWLALVKHAEKAQKKYQNEDPYH
YKMKMKQFLYRKGFAIELIEKFLSE

Nucleotide


Download         Length: 798 bp        

>NTDB_id=633606 KDJ21_RS01915 WP_121664475.1 373197..373994(-) (recX) [Metabacillus litoralis strain NCTR108]
ATGGCAATTATTACAAAAATTACTACACAAAAGCAATCTGATGAAAGATACAATATTTTCCTCGATGATGGTACGGGGGA
AAAGTATGCTTTTAGCGTTGATCAAGACATTTTAATAAAACATAATCTTCAAAAAGGCAAAGAACTAGATGAATTTGATA
TCGTTGAGATAAAATATGGTGATGATAGAAAGAAGGCTTATAATAAGGCGTTAGAGTTCCTAAGTTATCGTATGCGCTCA
GTTAAAGAAGTAGAGGATCATTTGGCGAAAAAGGAATATCATGAATCGGTAATAAAGGAAGTCATCGCTAAATTAAAAGA
ATTTAACTATGTAGATGATTTTGAATTTGCACTAGCCTATGTGCGGACCCAGAAGCAAACAAATGGGAAAGGTCCTACTG
TATTAACTCGTGAATTGGCTATGAAAGGAATTGGACAATCTATAGTAGAACAGGTCTTGGAGGAATATAATCAAGATGAG
CAGATTGAAGAGGCCGTTGCTCATGCTGAAAAACTTTTGAAAAAAAATAATAAACTTTCAACGATTCAGCTTAAGCAAAA
AATCGAGCAGCATCTACTAAGAAAAGGGTTTTCCTATAATATCATTTCAACTGCGTTAGAGGAAGTCGACTATGAGCAAG
ATGAATCTGAAGAGTGGTTAGCGTTAGTTAAGCATGCGGAAAAGGCTCAGAAAAAATATCAAAATGAAGATCCTTATCAC
TACAAAATGAAAATGAAGCAGTTTTTATATAGAAAAGGTTTTGCGATAGAATTAATTGAAAAGTTTTTAAGTGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

56.981

100

0.57