Detailed information NTG0633532

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N7219_RS22940
• Genome accession: NZ_CP104846
• Coordinates: 4690692..4691717 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain DFS.1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4685692..4696717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N7219_RS22920 (N7219_22920)	metJ	4686877..4687194 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
N7219_RS22925 (N7219_22925)	yiiX	4687254..4687862 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
N7219_RS22930 (N7219_22930)	rpmE	4687923..4688135 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
N7219_RS22935 (N7219_22935)	priA	4688338..4690536 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
N7219_RS22940 (N7219_22940)	cytR	4690692..4691717 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
N7219_RS22945 (N7219_22945)	ftsN	4691809..4692768 (+)	960	WP_000068834.1	cell division protein FtsN	-
N7219_RS22950 (N7219_22950)	hslV	4692861..4693391 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N7219_RS22955 (N7219_22955)	hslU	4693401..4694732 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
N7219_RS22960 (N7219_22960)	menA	4694799..4695725 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N7219_RS22965 (N7219_22965)	rraA	4695818..4696303 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N7219_RS22970 (N7219_22970)	zapB	4696388..4696633 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=633532 N7219_RS22940 WP_000644908.1 4690692..4691717(+) (cytR) [Escherichia coli strain DFS.1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=633532 N7219_RS22940 WP_000644908.1 4690692..4691717(+) (cytR) [Escherichia coli strain DFS.1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625