Detailed information NTG0633290

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N6H17_RS21330
• Genome accession: NZ_CP104788
• Coordinates: 4340086..4341111 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain SHP24
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4335086..4346111

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N6H17_RS21300 (N6H17_21310)	zapB	4335170..4335415 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
N6H17_RS21305 (N6H17_21315)	rraA	4335500..4335985 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N6H17_RS21310 (N6H17_21320)	menA	4336078..4337004 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N6H17_RS21315 (N6H17_21325)	hslU	4337071..4338402 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
N6H17_RS21320 (N6H17_21330)	hslV	4338412..4338942 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N6H17_RS21325 (N6H17_21335)	ftsN	4339035..4339994 (-)	960	WP_000068828.1	cell division protein FtsN	-
N6H17_RS21330 (N6H17_21340)	cytR	4340086..4341111 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
N6H17_RS21335 (N6H17_21345)	priA	4341267..4343465 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
N6H17_RS21340 (N6H17_21350)	rpmE	4343668..4343880 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
N6H17_RS21345 (N6H17_21355)	yiiX	4343941..4344549 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
N6H17_RS21350 (N6H17_21360)	metJ	4344733..4345050 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=633290 N6H17_RS21330 WP_000644904.1 4340086..4341111(-) (cytR) [Escherichia coli strain SHP24]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=633290 N6H17_RS21330 WP_000644904.1 4340086..4341111(-) (cytR) [Escherichia coli strain SHP24]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628