Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | N7E56_RS07015 | Genome accession | NZ_CP104786 |
| Coordinates | 1462414..1463520 (+) | Length | 368 a.a. |
| NCBI ID | WP_001187342.1 | Uniprot ID | A0ABX6CGL8 |
| Organism | Acinetobacter baumannii strain Ab-3556 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1457414..1468520
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7E56_RS06980 | grxD | 1457759..1458100 (-) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| N7E56_RS06985 | - | 1458328..1459536 (+) | 1209 | WP_000129953.1 | aspartate aminotransferase family protein | - |
| N7E56_RS06990 | - | 1459587..1460018 (-) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| N7E56_RS06995 | - | 1460159..1460533 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| N7E56_RS07000 | - | 1461071..1461304 (-) | 234 | WP_000616034.1 | hypothetical protein | - |
| N7E56_RS07005 | - | 1461520..1461879 (+) | 360 | WP_000185571.1 | hypothetical protein | - |
| N7E56_RS07010 | - | 1461980..1462306 (+) | 327 | WP_000955083.1 | hypothetical protein | - |
| N7E56_RS07015 | pilA | 1462414..1463520 (+) | 1107 | WP_001187342.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| N7E56_RS07020 | - | 1463710..1464306 (+) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| N7E56_RS07025 | - | 1464532..1465203 (+) | 672 | WP_000175350.1 | DUF2057 domain-containing protein | - |
| N7E56_RS07030 | - | 1465276..1465800 (+) | 525 | WP_000593801.1 | GNAT family N-acetyltransferase | - |
| N7E56_RS07035 | - | 1465813..1466112 (-) | 300 | WP_085916945.1 | cyd operon YbgE family protein | - |
| N7E56_RS07040 | cydX | 1466113..1466214 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| N7E56_RS07045 | cydB | 1466228..1467373 (-) | 1146 | WP_000575152.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39919.72 Da Isoelectric Point: 4.9872
>NTDB_id=633177 N7E56_RS07015 WP_001187342.1 1462414..1463520(+) (pilA) [Acinetobacter baumannii strain Ab-3556]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=633177 N7E56_RS07015 WP_001187342.1 1462414..1463520(+) (pilA) [Acinetobacter baumannii strain Ab-3556]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
86.685 |
0.451 |