Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LQK05_RS13840 Genome accession   NZ_CP088157
Coordinates   2741005..2741670 (-) Length   221 a.a.
NCBI ID   WP_000697877.1    Uniprot ID   A0A0D1JN68
Organism   Staphylococcus aureus strain 199     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2736005..2746670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LQK05_RS13820 (LQK05_13820) - 2736474..2736587 (-) 114 WP_011447078.1 hypothetical protein -
  LQK05_RS13825 (LQK05_13825) - 2737246..2739246 (-) 2001 WP_077156118.1 ABC transporter permease -
  LQK05_RS13830 (LQK05_13830) - 2739243..2739998 (-) 756 WP_077156117.1 ABC transporter ATP-binding protein -
  LQK05_RS13835 (LQK05_13835) braS 2740107..2740994 (-) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  LQK05_RS13840 (LQK05_13840) braR 2741005..2741670 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  LQK05_RS13845 (LQK05_13845) - 2741696..2741896 (-) 201 WP_000604727.1 hypothetical protein -
  LQK05_RS13850 (LQK05_13850) - 2742094..2743518 (+) 1425 WP_000953744.1 alkaline phosphatase -
  LQK05_RS13855 (LQK05_13855) - 2743588..2743698 (+) 111 WP_001791296.1 hypothetical protein -
  LQK05_RS13860 (LQK05_13860) - 2743801..2744256 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  LQK05_RS13865 (LQK05_13865) - 2744501..2745262 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25415.49 Da        Isoelectric Point: 4.7961

>NTDB_id=633002 LQK05_RS13840 WP_000697877.1 2741005..2741670(-) (braR) [Staphylococcus aureus strain 199]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=633002 LQK05_RS13840 WP_000697877.1 2741005..2741670(-) (braR) [Staphylococcus aureus strain 199]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1JN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

100

100

1