Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CX511_RS24160 Genome accession   NZ_CP088149
Coordinates   5364012..5364422 (-) Length   136 a.a.
NCBI ID   WP_045181955.1    Uniprot ID   A0AB39B227
Organism   Pseudomonas sp. S06B 330     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5359012..5369422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CX511_RS24145 - 5360989..5363034 (-) 2046 WP_045181961.1 methyl-accepting chemotaxis protein -
  CX511_RS24150 - 5363050..5363604 (-) 555 WP_101293774.1 chemotaxis protein CheW -
  CX511_RS24155 pilH 5363601..5363966 (-) 366 WP_045181957.1 twitching motility response regulator PilH -
  CX511_RS24160 pilG 5364012..5364422 (-) 411 WP_045181955.1 twitching motility response regulator PilG Regulator
  CX511_RS24165 gshB 5364650..5365603 (+) 954 WP_045181953.1 glutathione synthase -
  CX511_RS24170 - 5365713..5366618 (+) 906 WP_045181951.1 energy transducer TonB -
  CX511_RS24175 - 5366670..5367239 (+) 570 WP_045181949.1 YqgE/AlgH family protein -
  CX511_RS24180 ruvX 5367239..5367673 (+) 435 WP_045181945.1 Holliday junction resolvase RuvX -
  CX511_RS24185 pyrR 5367734..5368252 (+) 519 WP_045181943.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CX511_RS24190 - 5368265..5369269 (+) 1005 WP_045181941.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14916.19 Da        Isoelectric Point: 5.5984

>NTDB_id=632927 CX511_RS24160 WP_045181955.1 5364012..5364422(-) (pilG) [Pseudomonas sp. S06B 330]
MEQPGAALKVMVIDDSKTIRRTAQLLLSEVGCEVITATDGFDALAKIVDQHPQIIFVDVLMPRLDGYQTCALIKHNSAFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAEEQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=632927 CX511_RS24160 WP_045181955.1 5364012..5364422(-) (pilG) [Pseudomonas sp. S06B 330]
ATGGAACAGCCCGGCGCGGCACTGAAGGTGATGGTGATCGATGACTCGAAAACGATTCGTCGAACCGCCCAATTGTTGCT
CAGTGAGGTGGGGTGTGAAGTTATCACTGCCACTGACGGCTTTGATGCCCTGGCCAAGATCGTCGACCAGCATCCACAGA
TTATTTTTGTCGATGTGCTGATGCCGCGTCTGGATGGTTACCAGACCTGCGCCCTGATCAAGCACAACAGTGCCTTCAAG
GACACCCCAGTGATCCTCCTGTCGTCCCGTGATGGCTTGTTCGACAAGGCCAGGGGCCGTGTAGTCGGCTCCGATCAATT
TTTAACCAAGCCATTCAGCAAGGAAGAACTGCTGGACGCAATCAGGGCGCATGTGCCCGGGTTCGCCGCAGAAGAACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.6

91.912

0.64