Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   N7J24_RS01155 Genome accession   NZ_CP104749
Coordinates   192549..192920 (+) Length   123 a.a.
NCBI ID   WP_000601105.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain TAH 10/84 dUdp     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 187549..197920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7J24_RS01120 (N7J24_01120) - 188726..189091 (+) 366 WP_000285373.1 DUF1033 family protein -
  N7J24_RS01125 (N7J24_01125) comGA 189263..190234 (+) 972 WP_000250801.1 competence type IV pilus ATPase ComGA Machinery gene
  N7J24_RS01130 (N7J24_01130) comGB 190128..191171 (+) 1044 WP_228313184.1 competence type IV pilus assembly protein ComGB Machinery gene
  N7J24_RS01135 (N7J24_01135) comGC/cglC 191168..191497 (+) 330 WP_000793380.1 competence type IV pilus major pilin ComGC Machinery gene
  N7J24_RS01140 (N7J24_01140) comGD 191472..191885 (+) 414 WP_000244259.1 competence type IV pilus minor pilin ComGD Machinery gene
  N7J24_RS01145 (N7J24_01145) comGE 191857..192156 (+) 300 WP_038406052.1 competence type IV pilus minor pilin ComGE Machinery gene
  N7J24_RS01150 (N7J24_01150) comGF 192110..192571 (+) 462 WP_001874060.1 competence type IV pilus minor pilin ComGF Machinery gene
  N7J24_RS01155 (N7J24_01155) comGG 192549..192920 (+) 372 WP_000601105.1 competence type IV pilus minor pilin ComGG Machinery gene
  N7J24_RS01160 (N7J24_01160) comGH 193035..194009 (+) 975 WP_001008567.1 class I SAM-dependent methyltransferase Machinery gene
  N7J24_RS01165 (N7J24_01165) - 194041..195234 (+) 1194 WP_000047534.1 acetate kinase -
  N7J24_RS01170 (N7J24_01170) - 195362..195554 (+) 193 Protein_173 helix-turn-helix transcriptional regulator -
  N7J24_RS01175 (N7J24_01175) - 195533..195799 (+) 267 Protein_174 hypothetical protein -
  N7J24_RS01180 (N7J24_01180) - 195868..196533 (+) 666 WP_000008107.1 CPBP family intramembrane glutamic endopeptidase -
  N7J24_RS01185 (N7J24_01185) proC 196554..197324 (-) 771 WP_001876660.1 pyrroline-5-carboxylate reductase -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 13919.19 Da        Isoelectric Point: 10.0693

>NTDB_id=632875 N7J24_RS01155 WP_000601105.1 192549..192920(+) (comGG) [Streptococcus agalactiae strain TAH 10/84 dUdp]
MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYVSYLQ
EGNYLQVKVTLDKGGNYNHKFYRKIDTLQVPLKSNDNKASHKH

Nucleotide


Download         Length: 372 bp        

>NTDB_id=632875 N7J24_RS01155 WP_000601105.1 192549..192920(+) (comGG) [Streptococcus agalactiae strain TAH 10/84 dUdp]
ATGATTTTAAAGAAGAAACTTAAAGCTGGCATCCTTTTGCAAGCTATTGTATTGGCTGCTGTATTTACACTCGTCTTACA
GTTTTATCTAGCAAGAATATTGGCAACAGAAAGACAGTATCATAGCCAAATTGAAGCAAGTAAAGCTTATTTAACAGCGC
AGTTAGCTTATAAAACAATAGAAGGCGACTCCATATCAGGAAAATGTTATTTTACAGGAGGATATGTTTCATACCTCCAA
GAAGGGAACTATTTACAAGTTAAGGTTACATTGGATAAGGGAGGAAACTATAACCATAAGTTTTATCGTAAAATAGACAC
TCTCCAAGTACCTCTCAAGTCTAATGATAATAAAGCAAGCCATAAACATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

44.554

82.114

0.366
  comGG Streptococcus mutans UA159

44.554

82.114

0.366