Detailed information NTG0632671

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: N5P16_RS15745
• Genome accession: NZ_CP104734
• Coordinates: 3380806..3382254 (-)
• Length: 482 a.a.
• NCBI ID: WP_004922708.1
• Uniprot ID: Q6FED3
• Organism: Acinetobacter baylyi strain JAT2044
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3375806..3387254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5P16_RS15720 (N5P16_15720)	hisD	3376391..3377680 (-)	1290	WP_004922693.1	histidinol dehydrogenase	-
N5P16_RS15725 (N5P16_15725)	hisG	3377967..3378650 (-)	684	WP_004922697.1	ATP phosphoribosyltransferase	-
N5P16_RS15730 (N5P16_15730)	murA	3378650..3379906 (-)	1257	WP_004922701.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
N5P16_RS15735 (N5P16_15735)	ibaG	3379913..3380164 (-)	252	WP_004922703.1	BolA family iron metabolism protein IbaG	-
N5P16_RS15740 (N5P16_15740)	hpf	3380299..3380637 (-)	339	WP_004922705.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
N5P16_RS15745 (N5P16_15745)	rpoN/rpoN1	3380806..3382254 (-)	1449	WP_004922708.1	RNA polymerase factor sigma-54	Machinery gene

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 54814.47 Da
• Isoelectric Point: 4.6938

>NTDB_id=632671 N5P16_RS15745 WP_004922708.1 3380806..3382254(-) (rpoN/rpoN1) [Acinetobacter baylyi strain JAT2044]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKIEDEGTAESLTHLENKESRDLTQDLNADHLP
NDLPVDTDWDDVYTHQSTALASPEYEEREDNRQAEHTLKEHILAQVNLLHFSTVDRLIAYCVVDCLDEKGFLDAEIEEII
EAAQYLLSEAGLEEEIEADEVMVVLKHIQRLDPVGVGSKNLAECLKVQLDVLDVFTPLRNEALSLLKYYELLVSNDLNKL
LKSTNLTMLQVKEAIELLKTLKPYPGLDFEAQDSDYQVPDVVVTKKDQSWQVQLNPDIMPKLRINSFYSNMIRRADQSDG
NMYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQRNFFEIGPEGMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTSGGECSSTAIRARIKKMISAENPRKPLSDNIIANMLKDEGIDVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=632671 N5P16_RS15745 WP_004922708.1 3380806..3382254(-) (rpoN/rpoN1) [Acinetobacter baylyi strain JAT2044]
ATGAAGTTATCTGTTGGATTGAAAGTCGCGAATTCTTTATCGCTTACCCCTCAATTACAACAAGCGATTCGTTTATTGCA
ATTATCAAGTCTGGAGCTTGAACAAGAAATCCAGATTCAATTAGATAGTAATCCATTACTTGAAAAAATAGAAGATGAGG
GTACAGCAGAAAGTTTAACCCATTTAGAAAATAAAGAAAGCCGAGATCTAACTCAGGATTTAAATGCGGACCATTTACCC
AATGATCTTCCTGTGGATACCGATTGGGATGATGTGTATACGCATCAATCTACAGCTTTGGCTTCACCAGAATATGAAGA
ACGGGAAGATAATCGTCAAGCTGAGCATACTTTAAAAGAACATATTTTGGCCCAAGTAAATTTATTGCATTTTTCGACTG
TCGATCGGTTAATTGCTTATTGCGTTGTAGATTGTCTGGATGAGAAAGGTTTTCTAGATGCCGAAATTGAAGAAATTATT
GAAGCGGCACAGTATTTATTGTCAGAAGCAGGGCTTGAAGAAGAGATTGAGGCAGATGAGGTGATGGTTGTGCTTAAGCA
TATCCAGCGTCTTGATCCAGTTGGTGTAGGTTCAAAGAATCTTGCAGAATGTTTGAAAGTTCAATTGGATGTTCTTGATG
TTTTTACACCTTTAAGAAATGAAGCTTTAAGTTTATTAAAATATTATGAACTGCTTGTGAGTAACGATTTAAATAAATTA
TTAAAATCTACAAATTTGACCATGTTGCAAGTAAAAGAGGCAATTGAGCTGCTTAAAACATTAAAGCCTTATCCAGGCTT
GGACTTTGAAGCACAGGATTCAGATTATCAAGTTCCTGATGTGGTGGTCACTAAAAAAGATCAATCTTGGCAGGTACAGC
TTAATCCTGACATTATGCCCAAATTACGTATCAATTCATTCTATTCTAATATGATTCGTAGAGCAGATCAGAGTGATGGA
AACATGTATCTGCGCAATCAGATGCTGGAAGCCAAAAATTTTATAAAAAGCATTGATGAACGTCATAAAACATTATTAAA
AGTTGCAACCTGTATTGTTGAACATCAACGTAATTTTTTCGAAATTGGTCCCGAGGGTATGAAACCTTTGGTACTGCGTG
ATGTGGCAGAGGAAGTTGAGCTGCATGAGTCAACAGTGTCGCGGGTAACCACCAATAAATATATGCTGACTCCACGTGGC
TTATTCGAATTGAAATACTTTTTTTCAAGTCATGTCGGAACAACCTCTGGAGGAGAGTGTTCTTCAACTGCGATTCGTGC
GCGTATTAAAAAAATGATTTCTGCGGAAAATCCACGTAAACCTTTGTCGGATAATATTATTGCAAATATGCTCAAAGATG
AAGGAATTGATGTAGCGCGTAGAACCGTTGCAAAATATCGTGAATCGTTACATATCCCCTCATCTTCTGAAAGAAAAGTC
TTGATCTGA

Domains

Predicted by InterProScan.

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

• Sigma-54 factor, core binding domain (Sigma54_CBD) (109-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

3D structure

• AlphaFold DB: Q6FED3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	41.569	100	0.44