Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | N5P16_RS08200 | Genome accession | NZ_CP104734 |
| Coordinates | 1764858..1765979 (+) | Length | 373 a.a. |
| NCBI ID | WP_004928002.1 | Uniprot ID | Q6FA31 |
| Organism | Acinetobacter baylyi strain JAT2044 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1759858..1770979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5P16_RS08170 (N5P16_08170) | - | 1760023..1760397 (-) | 375 | WP_004928023.1 | DUF2750 domain-containing protein | - |
| N5P16_RS08175 (N5P16_08175) | - | 1760524..1760757 (-) | 234 | WP_004928020.1 | hypothetical protein | - |
| N5P16_RS08180 (N5P16_08180) | - | 1760979..1761338 (+) | 360 | WP_004928017.1 | hypothetical protein | - |
| N5P16_RS08185 (N5P16_08185) | - | 1761451..1761786 (+) | 336 | WP_004928014.1 | hypothetical protein | - |
| N5P16_RS08190 (N5P16_08190) | - | 1761783..1763273 (-) | 1491 | WP_004928011.1 | M16 family metallopeptidase | - |
| N5P16_RS08195 (N5P16_08195) | - | 1763288..1764598 (-) | 1311 | WP_370458636.1 | M16 family metallopeptidase | - |
| N5P16_RS08200 (N5P16_08200) | pilA | 1764858..1765979 (+) | 1122 | WP_004928002.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| N5P16_RS08205 (N5P16_08205) | - | 1766173..1766769 (+) | 597 | WP_004927999.1 | nitroreductase family protein | - |
| N5P16_RS08210 (N5P16_08210) | - | 1766975..1767625 (+) | 651 | WP_004927996.1 | DUF2057 domain-containing protein | - |
| N5P16_RS08215 (N5P16_08215) | - | 1767706..1768254 (+) | 549 | WP_004927992.1 | GNAT family N-acetyltransferase | - |
| N5P16_RS08220 (N5P16_08220) | - | 1768272..1768571 (-) | 300 | WP_171056921.1 | cyd operon YbgE family protein | - |
| N5P16_RS08225 (N5P16_08225) | cydX | 1768573..1768674 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| N5P16_RS08230 (N5P16_08230) | cydB | 1768695..1769840 (-) | 1146 | WP_004927983.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 40429.07 Da Isoelectric Point: 5.1728
>NTDB_id=632649 N5P16_RS08200 WP_004928002.1 1764858..1765979(+) (pilA) [Acinetobacter baylyi strain JAT2044]
MQQQSNMHNKFLIDADIGDDDVTLPNLPAVDVPIVETPTATSTTESPSVVSQQKTETEQESESENKSGFFSRMKQGLTKT
RRNLADGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKP
LHIDPNKTPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNNISVVAQGHGADSASVI
FDAFESARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGIT
ITKLDGTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETDK
MQQQSNMHNKFLIDADIGDDDVTLPNLPAVDVPIVETPTATSTTESPSVVSQQKTETEQESESENKSGFFSRMKQGLTKT
RRNLADGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKP
LHIDPNKTPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNNISVVAQGHGADSASVI
FDAFESARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGIT
ITKLDGTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETDK
Nucleotide
Download Length: 1122 bp
>NTDB_id=632649 N5P16_RS08200 WP_004928002.1 1764858..1765979(+) (pilA) [Acinetobacter baylyi strain JAT2044]
ATGCAACAGCAATCCAATATGCACAATAAATTCTTGATAGATGCTGATATCGGTGATGACGATGTCACATTGCCTAATTT
ACCAGCAGTTGATGTGCCTATTGTTGAAACCCCTACAGCCACATCTACGACTGAAAGCCCGTCAGTTGTATCACAACAAA
AAACTGAAACAGAACAAGAGTCTGAATCAGAGAATAAAAGTGGTTTCTTTAGCCGCATGAAACAAGGCTTGACTAAAACC
CGCCGTAACTTAGCAGATGGTATGGTCAACATTCTGATTGGTGGTAAAGAAATTGATGACGAACTGCTAGAAGAAGTTGA
AGAACAATTACTTGTCGCGGATATTGGTGTCGATGCAACCAAAACGATTATTACCAATCTCACCGAGCGTACAGCACGTG
GTGACCTGATTTATTCACATTCTTTATATAAGGCGCTACAGGAAGAATTAGTTGCACTTTTGGCACCTCGTGTTAAACCG
TTACATATCGATCCAAATAAGACGCCATATGTAATTTTAATGGTAGGGGTAAATGGCGTAGGAAAAACGACGACCATTGG
CAAACTTGCAAAGCGTCTTCAGGGTGAAGGCAAAAAAGTGATGCTTGCAGCAGGGGATACCTTTCGTGCTGCGGCTACCG
AGCAATTGCAAATCTGGGGGGAGCGCAACAATATTTCAGTAGTTGCACAAGGTCATGGTGCAGATAGTGCTTCAGTAATT
TTTGATGCATTTGAAAGTGCGCGTGCAAAAGGGATTGATGTATTGATCGCTGATACTGCAGGTCGTTTACATAATAAAAG
TAACTTGATGGAAGAACTTAAAAAAGTAAAACGTGTCATGCAAAAAATTGATGCAACAGCCCCTCATGAAATTATGTTGG
TGGTTGATGCTGGAACGGGTCAAAATGCGATTAATCAGGTACAGGAGTTTGATCAGGCTGTAGGATTAACGGGTATTACC
ATTACCAAACTTGATGGAACCGCAAAAGGTGGTGTTCTGTTTAATATTGCAAGTCGTACACATGTACCAATTCGCTTTAT
TGGCGTAGGTGAAAAGATTGATGACTTACGTCCTTTCTCTGCCAAATCTTTTGTTGCTGCCCTGTTCGAAACAGACAAAT
AA
ATGCAACAGCAATCCAATATGCACAATAAATTCTTGATAGATGCTGATATCGGTGATGACGATGTCACATTGCCTAATTT
ACCAGCAGTTGATGTGCCTATTGTTGAAACCCCTACAGCCACATCTACGACTGAAAGCCCGTCAGTTGTATCACAACAAA
AAACTGAAACAGAACAAGAGTCTGAATCAGAGAATAAAAGTGGTTTCTTTAGCCGCATGAAACAAGGCTTGACTAAAACC
CGCCGTAACTTAGCAGATGGTATGGTCAACATTCTGATTGGTGGTAAAGAAATTGATGACGAACTGCTAGAAGAAGTTGA
AGAACAATTACTTGTCGCGGATATTGGTGTCGATGCAACCAAAACGATTATTACCAATCTCACCGAGCGTACAGCACGTG
GTGACCTGATTTATTCACATTCTTTATATAAGGCGCTACAGGAAGAATTAGTTGCACTTTTGGCACCTCGTGTTAAACCG
TTACATATCGATCCAAATAAGACGCCATATGTAATTTTAATGGTAGGGGTAAATGGCGTAGGAAAAACGACGACCATTGG
CAAACTTGCAAAGCGTCTTCAGGGTGAAGGCAAAAAAGTGATGCTTGCAGCAGGGGATACCTTTCGTGCTGCGGCTACCG
AGCAATTGCAAATCTGGGGGGAGCGCAACAATATTTCAGTAGTTGCACAAGGTCATGGTGCAGATAGTGCTTCAGTAATT
TTTGATGCATTTGAAAGTGCGCGTGCAAAAGGGATTGATGTATTGATCGCTGATACTGCAGGTCGTTTACATAATAAAAG
TAACTTGATGGAAGAACTTAAAAAAGTAAAACGTGTCATGCAAAAAATTGATGCAACAGCCCCTCATGAAATTATGTTGG
TGGTTGATGCTGGAACGGGTCAAAATGCGATTAATCAGGTACAGGAGTTTGATCAGGCTGTAGGATTAACGGGTATTACC
ATTACCAAACTTGATGGAACCGCAAAAGGTGGTGTTCTGTTTAATATTGCAAGTCGTACACATGTACCAATTCGCTTTAT
TGGCGTAGGTGAAAAGATTGATGACTTACGTCCTTTCTCTGCCAAATCTTTTGTTGCTGCCCTGTTCGAAACAGACAAAT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
53.746 |
82.306 |
0.442 |