Detailed information NTG0632612

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LPA45_RS01615
• Genome accession: NZ_CP088083
• Coordinates: 338025..339188 (-)
• Length: 387 a.a.
• NCBI ID: WP_367394830.1
• Uniprot ID: -
• Organism: Cupriavidus sp. Agwp_2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 333025..344188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPA45_RS01595 (LPA45_01590)	-	333924..335264 (-)	1341	WP_116317003.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
LPA45_RS01600 (LPA45_01595)	-	335686..336321 (-)	636	WP_116317807.1	ANTAR domain-containing response regulator	-
LPA45_RS01605 (LPA45_01600)	-	336564..337265 (+)	702	WP_367394828.1	fumarylacetoacetate hydrolase family protein	-
LPA45_RS01610 (LPA45_01605)	maiA	337270..337917 (+)	648	WP_367394829.1	maleylacetoacetate isomerase	-
LPA45_RS01615 (LPA45_01610)	pilA	338025..339188 (-)	1164	WP_367394830.1	signal recognition particle-docking protein FtsY	Machinery gene
LPA45_RS01620 (LPA45_01615)	-	339417..340955 (+)	1539	WP_367394831.1	M16 family metallopeptidase	-
LPA45_RS01625 (LPA45_01620)	-	340965..342356 (+)	1392	WP_367394832.1	M16 family metallopeptidase	-
LPA45_RS01630 (LPA45_01625)	rsmD	342445..343152 (+)	708	WP_317919929.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LPA45_RS01635 (LPA45_01630)	coaD	343392..343877 (+)	486	WP_116317009.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 41118.75 Da
• Isoelectric Point: 6.8884

>NTDB_id=632612 LPA45_RS01615 WP_367394830.1 338025..339188(-) (pilA) [Cupriavidus sp. Agwp_2]
MFSFWKKRKAEPASVETPAPAPAPLEAPAPTPTPTPAPAPVPAPAPVPTPTPVPAQVPPPAPAPVAAPEPAAAIETLELV
PAPAVTAEARQGWMHRLRTGLSKTSRNIGTLFVGVKVDEALFEELETALLMADAGVEATEYLLAELRKRVRSERIESAEG
VKAALKTLLTELLRPLEKTMALGREQPLVMMIAGVNGAGKTTSIGKLCKHFQRYDQKVLLAAGDTFRAAAREQLTIWGER
NNVTVVAQESGDPAAVIFDAVNAAKARGIDIVMADTAGRLPTQLHLMEELKKVKRVISKAMPTAPHEVLLVIDANTGQNA
LQQTRAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFKAEEFAEALLG

Nucleotide

• Length: 1164 bp

>NTDB_id=632612 LPA45_RS01615 WP_367394830.1 338025..339188(-) (pilA) [Cupriavidus sp. Agwp_2]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCCGAGCCCGCGTCCGTCGAGACGCCAGCCCCGGCACCCGCGCCGCTAGAGGC
GCCCGCGCCCACCCCCACGCCCACACCCGCGCCTGCCCCGGTCCCCGCTCCGGCTCCGGTCCCGACGCCGACACCGGTTC
CCGCACAGGTGCCGCCCCCGGCGCCGGCCCCCGTGGCCGCGCCGGAACCGGCCGCCGCCATCGAAACGCTTGAACTGGTC
CCCGCCCCCGCAGTCACCGCTGAAGCCCGGCAAGGGTGGATGCATCGGCTGCGCACGGGCCTGTCCAAGACCAGCCGCAA
CATCGGCACGCTGTTCGTGGGCGTCAAGGTCGACGAGGCGCTGTTCGAAGAACTGGAAACCGCGCTGCTGATGGCCGACG
CGGGCGTGGAAGCCACCGAATACCTGCTGGCCGAGCTGCGCAAGCGGGTCAGGTCCGAGCGCATCGAATCGGCAGAAGGC
GTCAAGGCCGCGCTCAAGACGCTGCTGACCGAGCTGCTTCGTCCGCTGGAAAAAACCATGGCGCTGGGCCGCGAGCAGCC
CCTGGTGATGATGATCGCGGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGCGCT
ACGACCAGAAGGTCCTGCTGGCCGCTGGCGATACCTTCCGCGCCGCCGCGCGCGAGCAGCTGACAATCTGGGGCGAGCGC
AACAACGTCACCGTGGTGGCGCAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTGAACGCGGCCAAGGCGCG
CGGCATCGACATCGTGATGGCTGATACCGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAGGAGCTGAAGAAGGTCA
AGCGCGTCATCAGCAAGGCCATGCCGACGGCGCCGCATGAGGTGCTGCTGGTGATCGACGCCAATACCGGCCAGAATGCC
CTGCAGCAGACCCGCGCCTTCGATGATGCGCTGGGGCTGACCGGCCTGATCGTGACCAAGCTGGATGGCACCGCCAAGGG
CGGCATCCTGGCGGCGATCGCGCGCCAGCGCCCGGTGCCGGTGTACTTCATCGGCGTGGGCGAGAAGGTGGAGGACCTGC
AGCCCTTCAAGGCGGAGGAATTCGCCGAAGCGCTGCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (112-167)

• SRP54-type protein, GTPase domain (SRP54) (188-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.19	100	0.556