Detailed information NTG0632492

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: KO561_RS06345
• Genome accession: NZ_CP088020
• Coordinates: 1203232..1204200 (+)
• Length: 322 a.a.
• NCBI ID: WP_331000860.1
• Uniprot ID: -
• Organism: Radiobacillus kanasensis strain 80
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1198232..1209200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KO561_RS06300 (KO561_06300)	-	1198372..1198875 (+)	504	WP_231096276.1	hypothetical protein	-
KO561_RS06305 (KO561_06305)	-	1198890..1199150 (+)	261	WP_231096277.1	spore germination protein	-
KO561_RS06310 (KO561_06310)	-	1199184..1199447 (-)	264	WP_231096278.1	spore germination protein	-
KO561_RS06315 (KO561_06315)	-	1199444..1199800 (-)	357	WP_231096279.1	Hsp20/alpha crystallin family protein	-
KO561_RS06320 (KO561_06320)	-	1199870..1200919 (+)	1050	WP_231096280.1	hypothetical protein	-
KO561_RS06325 (KO561_06325)	-	1200951..1201772 (-)	822	WP_231096281.1	undecaprenyl-diphosphate phosphatase	-
KO561_RS06330 (KO561_06330)	-	1201876..1202190 (+)	315	WP_331000834.1	hypothetical protein	-
KO561_RS06335 (KO561_06335)	-	1202252..1202428 (-)	177	WP_231096282.1	DUF2929 family protein	-
KO561_RS06340 (KO561_06340)	-	1202569..1203144 (+)	576	WP_231096283.1	hypothetical protein	-
KO561_RS06345 (KO561_06345)	med	1203232..1204200 (+)	969	WP_331000860.1	BMP family ABC transporter substrate-binding protein	Regulator
KO561_RS06350 (KO561_06350)	-	1204221..1204454 (-)	234	WP_231096285.1	hypothetical protein	-
KO561_RS06355 (KO561_06355)	-	1204630..1205565 (+)	936	WP_231096286.1	beta-ketoacyl-ACP synthase III	-
KO561_RS06360 (KO561_06360)	fabF	1205624..1206865 (+)	1242	WP_231096287.1	beta-ketoacyl-ACP synthase II	-
KO561_RS06370 (KO561_06370)	-	1207379..1208143 (+)	765	WP_231096289.1	YjbA family protein	-

Sequence

Protein

• Length: 322 a.a.
• Molecular weight: 35985.23 Da
• Isoelectric Point: 4.3091

>NTDB_id=632492 KO561_RS06345 WP_331000860.1 1203232..1204200(+) (med) [Radiobacillus kanasensis strain 80]
MRILRKLASVFIICLIVALLSSCNVNSQQQNINKVGMLVEGSINDQSWGSKGYKGLLEIKEQFDVDVYFKEGVTTQQQVN
HAIEEFANQGVNLVFGHSSIYGKMFKDIANEYPDVHFVYFNGGYSDDNLTSLNFSSHAMGFFGGMVAGKMTKTNQVGIIA
AHEWQPEIEGFFEGVNYQNPNAEVKMEFVNGWDNTERALDLFKSLKEENVDVYYPAGDSFSAPVINRVREAGLYAIGFVT
DQSNLGENTVLTSTVQYANRLYVQAAEDFNVGELQGGIFTFDFQDGVVEMGDFSPKVPGEFVADLERHIDNYKEDGLLPN
ER

Nucleotide

• Length: 969 bp

>NTDB_id=632492 KO561_RS06345 WP_331000860.1 1203232..1204200(+) (med) [Radiobacillus kanasensis strain 80]
GTGCGCATATTGAGAAAATTAGCTTCTGTATTCATAATCTGTCTCATTGTTGCTCTACTTTCTAGTTGTAATGTGAATTC
ACAGCAGCAAAACATTAACAAAGTAGGAATGCTAGTTGAAGGCTCCATTAATGATCAATCCTGGGGAAGTAAAGGGTACA
AGGGATTGTTAGAAATAAAAGAACAATTCGATGTTGACGTTTATTTTAAAGAAGGGGTTACGACCCAGCAACAAGTAAAC
CATGCTATCGAAGAGTTTGCGAACCAAGGGGTTAACCTTGTGTTTGGACATAGTAGTATTTATGGAAAGATGTTTAAAGA
TATCGCAAATGAGTATCCGGATGTTCATTTTGTTTATTTTAATGGAGGATACAGCGATGACAATCTAACCAGTCTTAATT
TTAGTTCCCACGCGATGGGCTTCTTTGGTGGAATGGTCGCAGGGAAAATGACGAAAACGAACCAAGTGGGTATTATCGCA
GCACATGAATGGCAACCAGAAATTGAGGGTTTTTTTGAAGGGGTTAATTATCAAAATCCAAATGCAGAAGTGAAGATGGA
GTTTGTAAATGGTTGGGACAACACAGAACGTGCTTTAGACTTATTTAAATCTTTAAAAGAAGAAAATGTAGATGTGTATT
ACCCAGCTGGAGACTCTTTTAGCGCACCTGTCATTAATCGAGTACGTGAGGCAGGACTTTATGCGATTGGATTTGTTACC
GATCAATCGAATTTGGGAGAGAACACCGTTTTAACAAGTACGGTGCAATATGCGAATCGTTTATATGTACAAGCCGCAGA
AGACTTTAATGTAGGCGAGTTGCAAGGTGGAATATTTACCTTTGATTTCCAAGATGGAGTGGTGGAAATGGGGGACTTCA
GTCCAAAGGTTCCGGGTGAATTTGTAGCTGATCTTGAGAGACATATTGATAACTATAAGGAAGATGGCTTATTGCCAAAC
GAAAGATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (32-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	48.896	98.447	0.481