Detailed information NTG0063243

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: N149_RS03150
• Genome accession: NC_022660
• Coordinates: 633276..634220 (-)
• Length: 314 a.a.
• NCBI ID: WP_023362005.1
• Uniprot ID: -
• Organism: Campylobacter coli 15-537360
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 628276..639220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N149_RS03115 (N149_1099)	-	628467..628667 (+)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-
N149_RS03120 (N149_1098)	-	628697..628996 (-)	300	WP_002777238.1	c-type cytochrome	-
N149_RS03125 (N149_1097)	-	629073..629633 (+)	561	WP_032703393.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
N149_RS03130 (N149_1096)	rfaD	629634..630587 (+)	954	WP_023362009.1	ADP-glyceromanno-heptose 6-epimerase	-
N149_RS03135 (N149_1095)	rfaE1	630580..631965 (+)	1386	WP_023362007.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
N149_RS03140 (N149_1094)	gmhA	631962..632522 (+)	561	WP_002777232.1	D-sedoheptulose 7-phosphate isomerase	-
N149_RS03145 (N149_1093)	-	632522..633283 (+)	762	WP_002826801.1	glycosyltransferase family 25 protein	-
N149_RS03150 (N149_1092)	waaF	633276..634220 (-)	945	WP_023362005.1	lipopolysaccharide heptosyltransferase II	Regulator
N149_RS03155 (N149_1091)	-	634280..635101 (+)	822	WP_002844798.1	glycosyltransferase family 2 protein	-
N149_RS03160 (N149_1090)	-	635144..636511 (+)	1368	WP_002844799.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
N149_RS03165 (N149_1089)	gmd	636512..637651 (+)	1140	WP_002844800.1	GDP-mannose 4,6-dehydratase	-
N149_RS03170 (N149_1088)	-	637644..638582 (+)	939	WP_002844801.1	NAD-dependent epimerase/dehydratase family protein	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36068.61 Da
• Isoelectric Point: 10.3770

>NTDB_id=63243 N149_RS03150 WP_023362005.1 633276..634220(-) (waaF) [Campylobacter coli 15-537360]
MKIFIHLPTWLGDAVMASPALYGVYHHFKNAEFILYGSFVSTALFKEFPNAKIIVENKKSRYKQTLSLRKKLGKIDLALS
FRSALSSKIILHILKAKKRYFFNKYNFKEEHQVLKYLYFIENSLDIKAHSKDLKLPFRLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHILKEKNVKVKNLCNKTTIKTLCQNIVFCDIFITNDS
GPMHIAAAYKTKTIAIFGPTKFTQTSPWQNQNAKLVHLNLSCMPCMQKTCPLKHHRCMKDLKPEKILEAIQNFT

Nucleotide

• Length: 945 bp

>NTDB_id=63243 N149_RS03150 WP_023362005.1 633276..634220(-) (waaF) [Campylobacter coli 15-537360]
ATGAAAATTTTTATCCATCTTCCCACTTGGCTAGGCGATGCAGTCATGGCCTCACCTGCTTTATATGGAGTTTATCATCA
TTTTAAAAATGCTGAATTTATCCTTTATGGATCTTTTGTATCTACAGCGCTTTTTAAGGAATTTCCTAATGCTAAAATCA
TTGTAGAAAATAAAAAATCACGCTACAAACAAACCCTTTCTTTACGCAAAAAACTTGGAAAAATCGATCTAGCCCTTTCT
TTTAGATCAGCTCTTTCCTCTAAGATCATTTTGCATATCCTTAAGGCAAAAAAAAGATATTTTTTTAACAAGTATAATTT
CAAAGAAGAACATCAGGTTTTAAAATATCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAGATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCCTAGGATTAAACCCTGGAGCG
AGTTTTGGAAGTGCTAAAAGATGGGATGCGAGCTATTTTGCACAAGTTGCTTTAAATTTTAGCAAAACTCATGAAATTTT
GATTTTTGGAGCAGGTAAAGCAGAACAAGAACTTTGCGATGAAATTTTTCATATACTAAAAGAAAAAAATGTCAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGTTTTTTGTGATATTTTCATCACAAACGATAGC
GGCCCTATGCACATAGCTGCCGCTTATAAAACAAAAACCATAGCTATTTTTGGGCCTACTAAATTTACCCAAACCTCACC
TTGGCAAAATCAAAATGCAAAATTAGTACATCTAAATTTATCTTGCATGCCTTGCATGCAAAAAACCTGTCCTTTAAAAC
ATCATCGGTGCATGAAAGATTTAAAACCGGAAAAAATTTTAGAAGCAATCCAAAATTTTACTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (108-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	82.748	99.682	0.825