Detailed information NTG0632410

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N5922_RS22740
• Genome accession: NZ_CP104681
• Coordinates: 4627164..4628189 (+)
• Length: 341 a.a.
• NCBI ID: WP_174575878.1
• Uniprot ID: -
• Organism: Escherichia coli strain 2022CK-00450
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4622164..4633189

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5922_RS22715 (N5922_22710)	metJ	4622601..4622918 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
N5922_RS22720 (N5922_22715)	yiiX	4623102..4623710 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
N5922_RS22725 (N5922_22720)	-	4623717..4624340 (+)	624	WP_000720774.1	TIGR02117 family protein	-
N5922_RS22730 (N5922_22725)	rpmE	4624395..4624607 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
N5922_RS22735 (N5922_22730)	priA	4624810..4627008 (+)	2199	WP_001295520.1	primosomal protein N'	Machinery gene
N5922_RS22740 (N5922_22735)	cytR	4627164..4628189 (+)	1026	WP_174575878.1	DNA-binding transcriptional regulator CytR	Regulator
N5922_RS22745 (N5922_22740)	ftsN	4628281..4629240 (+)	960	WP_071598226.1	cell division protein FtsN	-
N5922_RS22750 (N5922_22745)	hslV	4629333..4629863 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N5922_RS22755 (N5922_22750)	hslU	4629873..4631204 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
N5922_RS22760 (N5922_22755)	menA	4631271..4632197 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N5922_RS22765 (N5922_22760)	rraA	4632290..4632775 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N5922_RS22770 (N5922_22765)	zapB	4632860..4633105 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37761.75 Da
• Isoelectric Point: 6.5969

>NTDB_id=632410 N5922_RS22740 WP_174575878.1 4627164..4628189(+) (cytR) [Escherichia coli strain 2022CK-00450]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGGCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=632410 N5922_RS22740 WP_174575878.1 4627164..4628189(+) (cytR) [Escherichia coli strain 2022CK-00450]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGGCTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625