Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SAGCMC97051_RS07020 Genome accession   NZ_AP020310
Coordinates   1330910..1331392 (-) Length   160 a.a.
NCBI ID   WP_000163516.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GCMC97051     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1325910..1336392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAGCMC97051_RS07000 (SAGCMC97051_13090) alsS 1326169..1327851 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  SAGCMC97051_RS07005 (SAGCMC97051_13100) - 1327961..1329187 (-) 1227 WP_000934876.1 tetratricopeptide repeat protein -
  SAGCMC97051_RS07010 (SAGCMC97051_13110) - 1329177..1330367 (-) 1191 WP_050197462.1 AI-2E family transporter -
  SAGCMC97051_RS07015 (SAGCMC97051_13120) - 1330459..1330920 (-) 462 WP_000796045.1 NUDIX hydrolase -
  SAGCMC97051_RS07020 (SAGCMC97051_13130) mutX 1330910..1331392 (-) 483 WP_000163516.1 NUDIX hydrolase Machinery gene
  SAGCMC97051_RS07025 - 1331609..1332922 (+) 1314 WP_000403407.1 hypothetical protein -
  SAGCMC97051_RS07030 (SAGCMC97051_13150) - 1332968..1334101 (+) 1134 WP_000564846.1 ISAs1-like element IS1548 family transposase -
  SAGCMC97051_RS07040 hylB 1334186..1336153 (+) 1968 Protein_1311 hyaluronate lyase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18863.27 Da        Isoelectric Point: 4.4433

>NTDB_id=63230 SAGCMC97051_RS07020 WP_000163516.1 1330910..1331392(-) (mutX) [Streptococcus agalactiae strain GCMC97051]
MTKLATICYIDNGKELLLLYRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=63230 SAGCMC97051_RS07020 WP_000163516.1 1330910..1331392(-) (mutX) [Streptococcus agalactiae strain GCMC97051]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGTACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment