Detailed information NTG0632283

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LQF05_RS01155
• Genome accession: NZ_CP088004
• Coordinates: 262601..263857 (+)
• Length: 418 a.a.
• NCBI ID: WP_270067266.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain SB-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 257601..268857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LQF05_RS01135 (LQF05_01135)	-	258473..258877 (+)	405	WP_026006467.1	hypothetical protein	-
LQF05_RS01140 (LQF05_01140)	rsmD	258871..259488 (-)	618	WP_125872273.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LQF05_RS01145 (LQF05_01145)	-	259488..261029 (-)	1542	WP_270067265.1	M16 family metallopeptidase	-
LQF05_RS01150 (LQF05_01150)	-	261022..262374 (-)	1353	WP_125870617.1	M16 family metallopeptidase	-
LQF05_RS01155 (LQF05_01155)	pilA	262601..263857 (+)	1257	WP_270067266.1	signal recognition particle-docking protein FtsY	Machinery gene
LQF05_RS01160 (LQF05_01160)	ftsE	263854..264522 (+)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
LQF05_RS01165 (LQF05_01165)	ftsX	264522..265541 (+)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
LQF05_RS01170 (LQF05_01170)	rpoH	265653..266507 (+)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-

Sequence

Protein

• Length: 418 a.a.
• Molecular weight: 44540.73 Da
• Isoelectric Point: 4.7727

>NTDB_id=632283 LQF05_RS01155 WP_270067266.1 262601..263857(+) (pilA) [Stutzerimonas stutzeri strain SB-1]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPHAVEADLQPTEVIE
SPLLDPVPEPEPEPVSAPVVAATSEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLLTADVGV
EATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDASKRPYVILVVGVNGVGKTTTIGKLAKKLQLDG
KKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELKKVR
RVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGIDDLR
TFEADAFVKALFAQREDA

Nucleotide

• Length: 1257 bp

>NTDB_id=632283 LQF05_RS01155 WP_270067266.1 262601..263857(+) (pilA) [Stutzerimonas stutzeri strain SB-1]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCCGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCACGAGGAGCCTCACGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCTGCTAGACCCTGTACCCGAACCCGAACCCGAGCCGGTATCTGCCCCGGTCGTTGCGGCCACGTCGGAAGCGCC
GGCTAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATAGGCGAAGGCATGGCCAGCC
TGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAAACCCGCCTGCTGACCGCCGACGTCGGCGTC
GAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGACAGCGGCGCGCTCTACAC
GGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCGATGCCAGCAAGCGTCCCTACG
TGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGAAACTGCAACTCGACGGC
AAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTGGAGCAGCTGCAGGTCTGGGGCGAGCGCAACGG
CATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGCAGGCCGCCAAGGCACGCG
GCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTGATGGAAGAGTTGAAGAAGGTCCGC
CGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGGTACCGGACAGAACGCCAT
CAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCGACGGCACCGCCAAGGGCG
GCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAAGGCATCGACGATCTGCGC
ACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCTCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (128-193)

• SRP54-type protein, GTPase domain (SRP54) (213-412)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.286	100	0.495