Detailed information NTG0631922

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N5855_RS19790
• Genome accession: NZ_CP104629
• Coordinates: 4114230..4115255 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain AHM21C2872I
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4109230..4120255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5855_RS19765 (N5855_19720)	rraA	4109644..4110129 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N5855_RS19770 (N5855_19725)	menA	4110222..4111148 (-)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N5855_RS19775 (N5855_19730)	hslU	4111215..4112546 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
N5855_RS19780 (N5855_19735)	hslV	4112556..4113086 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N5855_RS19785 (N5855_19740)	ftsN	4113179..4114138 (-)	960	WP_000068837.1	cell division protein FtsN	-
N5855_RS19790 (N5855_19745)	cytR	4114230..4115255 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
N5855_RS19795 (N5855_19750)	priA	4115411..4117609 (-)	2199	WP_021557385.1	primosomal protein N'	Machinery gene
N5855_RS19800 (N5855_19755)	rpmE	4117812..4118024 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
N5855_RS19805 (N5855_19760)	-	4118184..4118576 (+)	393	Protein_3876	DUF6531 domain-containing protein	-
N5855_RS19810 (N5855_19765)	-	4118710..4119846 (+)	1137	Protein_3877	ISAs1-like element ISEc1 family transposase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=631922 N5855_RS19790 WP_000644904.1 4114230..4115255(-) (cytR) [Escherichia coli strain AHM21C2872I]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=631922 N5855_RS19790 WP_000644904.1 4114230..4115255(-) (cytR) [Escherichia coli strain AHM21C2872I]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTAATGGCACTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCACGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628