Detailed information NTG0631843

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N5859_RS21405
• Genome accession: NZ_CP104618
• Coordinates: 4395697..4396722 (+)
• Length: 341 a.a.
• NCBI ID: WP_124846218.1
• Uniprot ID: -
• Organism: Escherichia coli strain AHM9C68I
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4390697..4401722

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5859_RS21385 (N5859_21295)	metJ	4391758..4392075 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
N5859_RS21390 (N5859_21300)	yiiX	4392259..4392867 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
N5859_RS21395 (N5859_21305)	rpmE	4392928..4393140 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
N5859_RS21400 (N5859_21310)	priA	4393343..4395541 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
N5859_RS21405 (N5859_21315)	cytR	4395697..4396722 (+)	1026	WP_124846218.1	DNA-binding transcriptional regulator CytR	Regulator
N5859_RS21410 (N5859_21320)	ftsN	4396814..4397773 (+)	960	WP_000068828.1	cell division protein FtsN	-
N5859_RS21415 (N5859_21325)	hslV	4397866..4398396 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N5859_RS21420 (N5859_21330)	hslU	4398406..4399737 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
N5859_RS21425 (N5859_21335)	menA	4399804..4400730 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N5859_RS21430 (N5859_21340)	rraA	4400823..4401308 (+)	486	WP_284632723.1	ribonuclease E activity regulator RraA	-
N5859_RS21435 (N5859_21345)	zapB	4401393..4401638 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37835.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=631843 N5859_RS21405 WP_124846218.1 4395697..4396722(+) (cytR) [Escherichia coli strain AHM9C68I]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTASNHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=631843 N5859_RS21405 WP_124846218.1 4395697..4396722(+) (cytR) [Escherichia coli strain AHM9C68I]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGTCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628