Detailed information NTG0631513

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N5B54_RS22980
• Genome accession: NZ_CP104592
• Coordinates: 4665405..4666430 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain EC5931
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4660405..4671430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5B54_RS22960 (N5B54_22840)	metJ	4661590..4661907 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
N5B54_RS22965 (N5B54_22845)	yiiX	4661967..4662575 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
N5B54_RS22970 (N5B54_22850)	rpmE	4662636..4662848 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
N5B54_RS22975 (N5B54_22855)	priA	4663051..4665249 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
N5B54_RS22980 (N5B54_22860)	cytR	4665405..4666430 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
N5B54_RS22985 (N5B54_22865)	ftsN	4666522..4667481 (+)	960	WP_000068834.1	cell division protein FtsN	-
N5B54_RS22990 (N5B54_22870)	hslV	4667574..4668104 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N5B54_RS22995 (N5B54_22875)	hslU	4668114..4669445 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
N5B54_RS23000 (N5B54_22880)	menA	4669512..4670438 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N5B54_RS23005 (N5B54_22885)	rraA	4670531..4671016 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N5B54_RS23010 (N5B54_22890)	zapB	4671101..4671346 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=631513 N5B54_RS22980 WP_000644908.1 4665405..4666430(+) (cytR) [Escherichia coli strain EC5931]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=631513 N5B54_RS22980 WP_000644908.1 4665405..4666430(+) (cytR) [Escherichia coli strain EC5931]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625