Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | Q783_RS03315 | Genome accession | NC_022606 |
| Coordinates | 696915..698732 (+) | Length | 605 a.a. |
| NCBI ID | WP_023177325.1 | Uniprot ID | U5S7Y6 |
| Organism | Carnobacterium inhibens subsp. gilichinskyi | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 691915..703732
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q783_RS03295 (Q783_03340) | - | 692935..693876 (+) | 942 | WP_023177317.1 | ABC transporter ATP-binding protein | - |
| Q783_RS03300 (Q783_03345) | spxA | 694313..694711 (+) | 399 | WP_023177319.1 | transcriptional regulator SpxA | - |
| Q783_RS03305 (Q783_03350) | - | 694867..695538 (+) | 672 | WP_023177321.1 | adaptor protein MecA | - |
| Q783_RS03310 (Q783_03355) | - | 695657..696823 (+) | 1167 | WP_023177323.1 | competence protein CoiA | - |
| Q783_RS03315 (Q783_03360) | pepF | 696915..698732 (+) | 1818 | WP_023177325.1 | oligoendopeptidase F | Regulator |
| Q783_RS03320 (Q783_03365) | - | 699073..699759 (-) | 687 | WP_023177326.1 | DsbA family protein | - |
| Q783_RS03325 (Q783_03370) | - | 700214..700861 (+) | 648 | WP_023177328.1 | GTP pyrophosphokinase | - |
| Q783_RS03330 (Q783_03380) | - | 700956..701768 (+) | 813 | WP_023177330.1 | NAD kinase | - |
| Q783_RS03335 (Q783_03385) | - | 701758..702669 (+) | 912 | WP_043945585.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 605 a.a. Molecular weight: 69786.77 Da Isoelectric Point: 4.7179
>NTDB_id=63094 Q783_RS03315 WP_023177325.1 696915..698732(+) (pepF) [Carnobacterium inhibens subsp. gilichinskyi]
MSESKKLPKRNEVPSEWTWDLEVVFKSDDDFTLSYKELETKVKTVVSYKGTLNEGSKSFLKAIQAILDLSNQLETIYVYA
QLKNDQDTTNSTYQGMYEQATKLATQANEAISWFEPEVLELSEETLARYFNENDDLAIYKHFIDQLTAARKHVLSANEEA
LLAGAGEIFNASSRTFNILNNADITFPTIKDENGNDIQLSHGVYGQLMESTDRSVREAAFKNLYKVYDGLQNTFSSTLSS
HVKYHNYNAKVHHYDSAREKALSSNHIPESVYDTLLDVVHEHLPLLHRYVALRKELLNVEELHMYDMYTPISGEAGIKYT
YEEAEAETMKALKPLGEEYLSVLKKAFNNRWIDVMENEGKRSGAYSSGAYETNPYILLNWHDSLNHLYTLVHELGHSVHS
YYTRTNQPYVYGDYSIFLAEIASTTNENILTDYLLETQKDPKVRAYVLNHYLDGFKGTIFRQTQFAEFEHFIHEEAAKGT
PLTSEFLNNYYGELNARYYGPDVEKDPEIALEWTRIPHFYYNYYVYQYSTGFSAATALADKIVKDEDRALDNYLTYLKSG
NSDYPIEVMKKAGVDMTEKTYIEDAMKVFETRLNELEELIETLKD
MSESKKLPKRNEVPSEWTWDLEVVFKSDDDFTLSYKELETKVKTVVSYKGTLNEGSKSFLKAIQAILDLSNQLETIYVYA
QLKNDQDTTNSTYQGMYEQATKLATQANEAISWFEPEVLELSEETLARYFNENDDLAIYKHFIDQLTAARKHVLSANEEA
LLAGAGEIFNASSRTFNILNNADITFPTIKDENGNDIQLSHGVYGQLMESTDRSVREAAFKNLYKVYDGLQNTFSSTLSS
HVKYHNYNAKVHHYDSAREKALSSNHIPESVYDTLLDVVHEHLPLLHRYVALRKELLNVEELHMYDMYTPISGEAGIKYT
YEEAEAETMKALKPLGEEYLSVLKKAFNNRWIDVMENEGKRSGAYSSGAYETNPYILLNWHDSLNHLYTLVHELGHSVHS
YYTRTNQPYVYGDYSIFLAEIASTTNENILTDYLLETQKDPKVRAYVLNHYLDGFKGTIFRQTQFAEFEHFIHEEAAKGT
PLTSEFLNNYYGELNARYYGPDVEKDPEIALEWTRIPHFYYNYYVYQYSTGFSAATALADKIVKDEDRALDNYLTYLKSG
NSDYPIEVMKKAGVDMTEKTYIEDAMKVFETRLNELEELIETLKD
Nucleotide
Download Length: 1818 bp
>NTDB_id=63094 Q783_RS03315 WP_023177325.1 696915..698732(+) (pepF) [Carnobacterium inhibens subsp. gilichinskyi]
ATGAGCGAGTCAAAAAAATTACCAAAAAGAAACGAAGTACCGAGTGAATGGACATGGGATTTAGAAGTTGTTTTTAAGTC
AGATGACGATTTTACTCTTTCTTATAAAGAATTAGAAACAAAAGTTAAGACTGTTGTGTCTTACAAAGGTACACTAAATG
AAGGATCAAAAAGTTTCTTAAAAGCTATTCAAGCTATTTTGGACTTATCGAATCAATTAGAAACAATATACGTGTATGCT
CAATTAAAGAACGATCAAGATACAACTAATTCAACGTATCAAGGCATGTATGAACAAGCTACTAAATTAGCAACACAAGC
AAATGAAGCTATTTCGTGGTTTGAACCGGAAGTATTAGAATTATCTGAAGAAACATTGGCGCGCTATTTTAATGAAAACG
ATGACTTAGCTATCTACAAACATTTTATTGATCAATTAACAGCTGCTAGAAAGCATGTACTTAGCGCTAATGAAGAAGCT
TTATTAGCAGGTGCTGGAGAAATCTTTAATGCTTCAAGCCGAACTTTTAACATATTGAATAATGCAGATATTACTTTTCC
AACTATTAAAGATGAAAATGGAAATGATATCCAATTGTCACATGGAGTTTATGGACAGTTAATGGAAAGTACAGACCGCT
CTGTTCGTGAAGCTGCTTTTAAAAATCTTTATAAAGTATATGATGGATTGCAAAATACTTTTTCAAGTACCCTTTCTTCT
CATGTTAAATACCACAATTATAATGCAAAAGTACACCATTATGACTCTGCACGAGAGAAAGCATTAAGCAGTAACCATAT
TCCGGAATCTGTTTATGATACATTGCTTGATGTAGTACATGAGCATTTACCTTTGTTGCATCGCTATGTTGCTTTAAGAA
AAGAACTTTTAAATGTAGAAGAGCTTCATATGTATGATATGTACACACCTATTAGTGGTGAGGCTGGGATTAAATATACT
TATGAAGAAGCTGAAGCAGAAACAATGAAAGCCTTAAAACCGCTTGGAGAAGAGTATTTATCTGTGTTGAAGAAAGCTTT
CAACAATCGATGGATTGATGTTATGGAAAATGAAGGGAAAAGAAGTGGAGCGTACTCTTCAGGTGCTTACGAAACAAATC
CTTATATTCTTTTAAATTGGCATGACTCTCTTAATCATTTATATACTCTCGTTCATGAATTAGGGCACAGCGTTCACAGT
TACTACACTCGGACAAATCAGCCTTATGTATATGGAGATTATTCCATTTTCTTAGCAGAGATAGCTTCTACTACAAATGA
AAATATTTTAACAGATTATTTATTGGAAACTCAAAAAGATCCAAAAGTTAGAGCTTATGTACTAAATCATTATTTAGATG
GATTCAAAGGTACGATCTTCAGACAAACACAGTTTGCTGAATTTGAACATTTTATTCATGAAGAGGCAGCAAAGGGTACA
CCTTTAACTAGCGAATTTTTAAACAACTACTATGGTGAACTTAATGCGCGTTACTATGGTCCGGATGTTGAAAAAGATCC
TGAAATAGCTTTAGAATGGACCAGAATACCACATTTTTACTATAATTATTATGTTTACCAATATTCAACAGGATTTTCAG
CTGCTACAGCTCTAGCAGATAAAATTGTTAAAGATGAAGATAGAGCTTTAGATAACTATTTAACCTATTTAAAATCTGGA
AATAGTGATTATCCTATCGAAGTAATGAAAAAAGCTGGAGTAGATATGACAGAGAAAACGTATATAGAAGATGCTATGAA
AGTATTTGAAACAAGGTTAAACGAGTTAGAAGAATTGATTGAAACATTAAAAGATTAA
ATGAGCGAGTCAAAAAAATTACCAAAAAGAAACGAAGTACCGAGTGAATGGACATGGGATTTAGAAGTTGTTTTTAAGTC
AGATGACGATTTTACTCTTTCTTATAAAGAATTAGAAACAAAAGTTAAGACTGTTGTGTCTTACAAAGGTACACTAAATG
AAGGATCAAAAAGTTTCTTAAAAGCTATTCAAGCTATTTTGGACTTATCGAATCAATTAGAAACAATATACGTGTATGCT
CAATTAAAGAACGATCAAGATACAACTAATTCAACGTATCAAGGCATGTATGAACAAGCTACTAAATTAGCAACACAAGC
AAATGAAGCTATTTCGTGGTTTGAACCGGAAGTATTAGAATTATCTGAAGAAACATTGGCGCGCTATTTTAATGAAAACG
ATGACTTAGCTATCTACAAACATTTTATTGATCAATTAACAGCTGCTAGAAAGCATGTACTTAGCGCTAATGAAGAAGCT
TTATTAGCAGGTGCTGGAGAAATCTTTAATGCTTCAAGCCGAACTTTTAACATATTGAATAATGCAGATATTACTTTTCC
AACTATTAAAGATGAAAATGGAAATGATATCCAATTGTCACATGGAGTTTATGGACAGTTAATGGAAAGTACAGACCGCT
CTGTTCGTGAAGCTGCTTTTAAAAATCTTTATAAAGTATATGATGGATTGCAAAATACTTTTTCAAGTACCCTTTCTTCT
CATGTTAAATACCACAATTATAATGCAAAAGTACACCATTATGACTCTGCACGAGAGAAAGCATTAAGCAGTAACCATAT
TCCGGAATCTGTTTATGATACATTGCTTGATGTAGTACATGAGCATTTACCTTTGTTGCATCGCTATGTTGCTTTAAGAA
AAGAACTTTTAAATGTAGAAGAGCTTCATATGTATGATATGTACACACCTATTAGTGGTGAGGCTGGGATTAAATATACT
TATGAAGAAGCTGAAGCAGAAACAATGAAAGCCTTAAAACCGCTTGGAGAAGAGTATTTATCTGTGTTGAAGAAAGCTTT
CAACAATCGATGGATTGATGTTATGGAAAATGAAGGGAAAAGAAGTGGAGCGTACTCTTCAGGTGCTTACGAAACAAATC
CTTATATTCTTTTAAATTGGCATGACTCTCTTAATCATTTATATACTCTCGTTCATGAATTAGGGCACAGCGTTCACAGT
TACTACACTCGGACAAATCAGCCTTATGTATATGGAGATTATTCCATTTTCTTAGCAGAGATAGCTTCTACTACAAATGA
AAATATTTTAACAGATTATTTATTGGAAACTCAAAAAGATCCAAAAGTTAGAGCTTATGTACTAAATCATTATTTAGATG
GATTCAAAGGTACGATCTTCAGACAAACACAGTTTGCTGAATTTGAACATTTTATTCATGAAGAGGCAGCAAAGGGTACA
CCTTTAACTAGCGAATTTTTAAACAACTACTATGGTGAACTTAATGCGCGTTACTATGGTCCGGATGTTGAAAAAGATCC
TGAAATAGCTTTAGAATGGACCAGAATACCACATTTTTACTATAATTATTATGTTTACCAATATTCAACAGGATTTTCAG
CTGCTACAGCTCTAGCAGATAAAATTGTTAAAGATGAAGATAGAGCTTTAGATAACTATTTAACCTATTTAAAATCTGGA
AATAGTGATTATCCTATCGAAGTAATGAAAAAAGCTGGAGTAGATATGACAGAGAAAACGTATATAGAAGATGCTATGAA
AGTATTTGAAACAAGGTTAAACGAGTTAGAAGAATTGATTGAAACATTAAAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
53.547 |
97.851 |
0.524 |