Detailed information NTG0630218

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: IUZ65_RS02600
• Genome accession: NZ_CP087590
• Coordinates: 540539..543922 (-)
• Length: 1127 a.a.
• NCBI ID: WP_229637967.1
• Uniprot ID: -
• Organism: Vibrio sp. VB16
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 535539..548922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IUZ65_RS02585 (IUZ65_002585)	-	535811..536842 (-)	1032	WP_195702246.1	ABC transporter permease	-
IUZ65_RS02590 (IUZ65_002590)	-	536845..537831 (-)	987	WP_195702247.1	ABC transporter permease	-
IUZ65_RS02595 (IUZ65_002595)	-	537992..539662 (-)	1671	WP_195702248.1	ABC transporter substrate-binding protein	-
IUZ65_RS02600 (IUZ65_002600)	chiS	540539..543922 (-)	3384	WP_229637967.1	response regulator	Regulator
IUZ65_RS02605 (IUZ65_002605)	rsmC	544037..545095 (-)	1059	WP_195702249.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
IUZ65_RS02610 (IUZ65_002610)	-	545171..546256 (-)	1086	WP_195702250.1	AI-2E family transporter	-
IUZ65_RS02615 (IUZ65_002615)	hemL	546682..547965 (-)	1284	WP_195702251.1	glutamate-1-semialdehyde 2,1-aminomutase	-
IUZ65_RS02620 (IUZ65_002620)	erpA	548236..548577 (+)	342	WP_195704977.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1127 a.a.
• Molecular weight: 127317.91 Da
• Isoelectric Point: 5.8661

>NTDB_id=630218 IUZ65_RS02600 WP_229637967.1 540539..543922(-) (chiS) [Vibrio sp. VB16]
MLTISRKQKFKRLQSTLMLAFLILSLAPLTITALFFLQSHKQDLQDQSHSFLTSVRDNKQQQVISYLNAQKSYVMGFVRS
ELAFASGGRFYGLVNAFQQLGSDLSETKINAQKRYITGSGDKINLAINKDSDDFIGSERYRLLHKRYHEAYSEILKRADF
DDILLVDIDGNVTYSNLKLDNFGTNLISGRNQANNLGSTFQQLHNQVKEQKDENATPIVMSDFSFDKNGQLYAWLAAPII
QQGYLHSYALMRLPIDGINRIISNQNNASTTLLVGSDFLPRSLDVSKEQIEESKPIIKLALANQSNELTYLNGNNQTIIA
AYAPIKTDHFHWAIVAQIPEDVAYTRIHKLELIFMAAMLIATIIVFIASHYFSRFITDPILKLAWTAEKVSAGNLDEEVI
NTERQDEIGRLAISFERMQRSIREKILTIKTQNKELEKNLTVIKKQNQDLQLSDKLKDEFLATTSHELRTPLHGMIGIAE
SLLSGACGSVPDQQQHQLGIIINSGQRLSHLIDDLLDYHKMVYGKTEINLSAINLGHSTSLVLELSSHLIGTKGIRIINQ
TADDLPLVSADPQRLEQVLYNLIGNAIKYTSEGKIIISAHHIDNKLRVQVVDTGQGIPSEQLEQVFEPLSQATSNPNQFR
QGAGLGLSISKQLIELMGGALYVSSQDSVGTTFSFTLPIASENEIKAAQQNQQQYHFQIPENNTPTQIENNALPDNLEGA
LLLIVDDEPVNLQILDSFLRIEGYRVKTANNGADAITLIETEKPELILLDVMMPGMSGYEVCEELRVTYDHGQLPIIMLT
ALSQANDRIHGFDIGANDYLTKPFNKQELAARIRAHLSASKAEQRRTENKQLLIELQRREQVEASLLETQGRLLEQLESA
PEAIICYRKDQRIRFANQTAIQLFNRSLEQLKRSNMDELIASKFLTQNKSHYCGDITIYVNDKVKTVSADILTLPEGSDI
QSMIIMNVENSVSDLRIEQLETAVDALSSYAFEGDKEKLENLKLLGQEFSQIVDQATITQSEKQQLLRETVVDAMIMAMF
YWTQATDKSKFDFAEQSGLWRVYLDRSTLQTRTLDKYLHLESLPKTPRWRNVLSSLDYILAHGSKETQERRELIQFRTKL
KGLLTEQ

Nucleotide

• Length: 3384 bp

>NTDB_id=630218 IUZ65_RS02600 WP_229637967.1 540539..543922(-) (chiS) [Vibrio sp. VB16]
ATGCTGACGATTTCAAGAAAACAAAAATTCAAACGCCTGCAGAGCACCTTAATGCTCGCATTTTTAATTTTAAGTTTAGC
GCCGCTTACTATCACTGCACTCTTTTTTCTTCAATCTCATAAGCAAGATCTTCAAGATCAAAGCCACTCGTTTCTTACTT
CAGTGCGCGACAACAAGCAGCAACAAGTTATCTCTTATTTAAATGCTCAAAAATCTTATGTCATGGGATTCGTTCGTTCA
GAATTAGCCTTTGCTAGCGGAGGGCGATTTTATGGGTTAGTCAACGCGTTTCAACAACTCGGATCTGATTTATCTGAGAC
GAAAATAAACGCCCAAAAACGTTATATCACCGGCTCCGGTGATAAAATTAATTTAGCTATTAATAAAGACTCTGACGATT
TTATAGGTAGTGAACGATATCGCTTACTGCATAAACGATATCATGAGGCGTATAGTGAAATACTGAAACGAGCAGATTTT
GATGATATTCTTCTAGTCGATATCGACGGTAATGTAACCTATTCGAATTTAAAACTGGATAACTTCGGTACTAATTTGAT
ATCAGGAAGGAACCAAGCGAATAACTTAGGCAGCACATTTCAACAACTCCATAACCAAGTAAAAGAGCAAAAGGATGAGA
ATGCTACTCCCATCGTCATGTCCGATTTTTCTTTTGATAAAAATGGGCAGCTATACGCCTGGCTGGCAGCACCAATTATC
CAACAAGGATATCTACACAGTTACGCACTAATGCGATTACCCATAGATGGTATCAATAGAATCATTTCTAACCAAAACAA
CGCCTCTACCACTTTATTAGTCGGTTCAGATTTTTTGCCACGCTCTCTGGATGTATCCAAAGAGCAGATTGAAGAGAGTA
AGCCAATCATTAAATTGGCTCTAGCGAATCAATCAAATGAACTCACTTATCTTAATGGCAATAATCAAACCATTATCGCC
GCTTACGCACCAATAAAAACGGACCACTTTCATTGGGCAATCGTTGCTCAAATACCGGAAGATGTTGCCTACACTAGGAT
CCACAAATTAGAACTCATTTTTATGGCAGCAATGTTAATTGCTACCATCATTGTATTTATTGCTTCTCACTATTTTTCAC
GTTTTATTACTGATCCTATATTAAAGCTGGCATGGACGGCAGAAAAAGTCTCCGCAGGAAACCTTGATGAAGAGGTAATC
AATACGGAACGTCAGGATGAAATAGGACGCTTGGCGATCAGTTTTGAACGCATGCAACGATCTATTCGAGAAAAAATTCT
CACGATAAAAACACAAAATAAAGAACTAGAAAAAAACCTTACAGTGATAAAGAAGCAGAACCAAGACCTACAATTATCCG
ATAAACTGAAAGATGAGTTTCTCGCAACAACCTCTCATGAATTAAGAACACCACTGCACGGCATGATTGGTATTGCAGAA
TCTCTGTTATCTGGCGCTTGCGGCTCGGTTCCCGACCAACAACAGCATCAATTAGGAATCATTATAAATAGTGGTCAACG
CCTGTCACATTTGATTGATGACCTACTCGATTATCACAAGATGGTATATGGCAAAACAGAAATTAACCTTTCTGCTATCA
ATTTAGGCCATTCTACAAGCTTAGTTTTAGAGCTTTCTAGTCACTTAATCGGTACAAAAGGAATTAGAATAATCAATCAA
ACGGCAGATGATCTTCCGCTAGTGTCCGCCGATCCTCAACGCCTAGAACAAGTTCTTTATAATCTTATTGGCAATGCTAT
CAAGTATACAAGTGAGGGGAAAATAATCATTTCAGCTCACCACATCGATAATAAATTACGTGTACAGGTTGTCGATACAG
GACAAGGTATACCTTCAGAGCAGCTAGAACAGGTCTTCGAACCTTTATCACAAGCAACAAGTAATCCAAATCAATTTCGA
CAGGGAGCTGGGCTCGGCCTCTCCATCAGCAAACAACTCATTGAACTAATGGGAGGAGCTCTCTATGTCAGCAGTCAAGA
CTCCGTTGGAACAACATTCAGTTTCACTTTACCTATTGCCTCAGAGAACGAAATTAAAGCAGCACAACAAAATCAACAGC
AGTATCATTTTCAAATACCAGAAAATAACACACCAACACAGATAGAAAATAATGCTCTTCCTGATAATTTAGAGGGAGCT
TTGTTACTCATTGTCGATGACGAACCCGTCAACCTGCAGATATTGGATAGTTTTTTACGGATTGAAGGATATAGAGTAAA
AACAGCAAACAATGGTGCCGATGCGATAACCTTAATCGAAACTGAGAAGCCAGAACTTATATTGCTAGATGTGATGATGC
CAGGAATGAGTGGTTATGAAGTATGTGAAGAACTGAGAGTCACTTACGACCACGGGCAATTACCTATTATAATGTTAACC
GCACTTAGCCAAGCTAACGATAGAATTCACGGTTTTGATATTGGTGCTAATGACTACCTGACTAAGCCATTTAATAAACA
GGAGCTTGCTGCCCGCATTCGAGCTCATTTGAGTGCAAGTAAAGCAGAACAACGGCGAACTGAAAACAAACAACTTCTAA
TAGAGTTACAACGACGAGAACAGGTAGAAGCGAGTCTGTTAGAAACACAAGGACGCCTGTTGGAACAACTTGAATCCGCT
CCGGAAGCAATAATATGCTATCGAAAGGATCAGCGTATTCGATTCGCCAACCAAACGGCCATTCAACTTTTCAATCGTTC
TTTAGAACAGCTCAAGCGATCCAATATGGATGAACTGATTGCATCCAAATTCTTAACACAGAATAAGTCTCACTACTGTG
GTGACATAACCATTTACGTTAACGATAAAGTTAAAACAGTCTCGGCTGATATTCTCACTTTGCCAGAAGGTTCTGATATC
CAGTCTATGATTATTATGAACGTTGAAAATAGCGTGTCGGATTTAAGAATAGAGCAGCTGGAAACCGCAGTGGATGCACT
ATCAAGCTACGCATTTGAAGGCGATAAAGAGAAACTAGAAAACTTAAAATTACTTGGTCAAGAATTTAGCCAAATAGTCG
ACCAAGCAACGATCACGCAATCGGAAAAGCAGCAGTTATTACGAGAGACGGTTGTAGATGCCATGATTATGGCGATGTTC
TACTGGACACAAGCGACCGACAAGAGCAAGTTTGACTTTGCTGAACAGAGTGGATTATGGCGCGTCTATTTAGATAGAAG
CACCTTACAAACCCGCACACTAGACAAGTATCTGCATTTAGAAAGTTTACCTAAAACCCCTCGCTGGAGAAATGTTCTCA
GCTCTTTAGATTACATTTTAGCCCACGGTTCAAAAGAAACTCAAGAACGCAGAGAGTTGATTCAATTTAGGACAAAACTC
AAAGGATTACTAACCGAGCAATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (571-679)

• His Kinase A (phospho-acceptor) domain (HisKA) (457-521)

• HAMP domain (HAMP) (372-424)

• Response regulator receiver domain (Response_reg) (723-834)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	63.307	100	0.635