Detailed information NTG0630176

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N5O79_RS14790
• Genome accession: NZ_CP104516
• Coordinates: 2935749..2936774 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain E4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2930749..2941774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5O79_RS14765 (N5O79_14765)	metJ	2931186..2931503 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
N5O79_RS14770 (N5O79_14770)	yiiX	2931687..2932295 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
N5O79_RS14775 (N5O79_14775)	-	2932302..2932925 (+)	624	WP_000720774.1	TIGR02117 family protein	-
N5O79_RS14780 (N5O79_14780)	rpmE	2932980..2933192 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
N5O79_RS14785 (N5O79_14785)	priA	2933395..2935593 (+)	2199	WP_098704092.1	primosomal protein N'	Machinery gene
N5O79_RS14790 (N5O79_14790)	cytR	2935749..2936774 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
N5O79_RS14795 (N5O79_14795)	ftsN	2936866..2937825 (+)	960	WP_000068828.1	cell division protein FtsN	-
N5O79_RS14800 (N5O79_14800)	hslV	2937918..2938448 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N5O79_RS14805 (N5O79_14805)	hslU	2938458..2939789 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
N5O79_RS14810 (N5O79_14810)	menA	2939856..2940782 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N5O79_RS14815 (N5O79_14815)	rraA	2940875..2941360 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N5O79_RS14820 (N5O79_14820)	zapB	2941445..2941690 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=630176 N5O79_RS14790 WP_000644904.1 2935749..2936774(+) (cytR) [Escherichia coli strain E4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=630176 N5O79_RS14790 WP_000644904.1 2935749..2936774(+) (cytR) [Escherichia coli strain E4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628