Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KUA31_RS09050 Genome accession   NZ_CP087578
Coordinates   1853401..1854030 (+) Length   209 a.a.
NCBI ID   WP_000839153.1    Uniprot ID   A0A9Q6Y251
Organism   Escherichia coli strain OSUCMP42NDM     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1848401..1859030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KUA31_RS09030 (KUA31_09030) ycbZ 1848790..1850550 (-) 1761 WP_000156526.1 AAA family ATPase -
  KUA31_RS09035 (KUA31_09035) matP 1850736..1851188 (+) 453 WP_000877161.1 macrodomain Ter protein MatP -
  KUA31_RS09040 (KUA31_09040) ompA 1851264..1852316 (-) 1053 WP_000750419.1 porin OmpA -
  KUA31_RS09045 (KUA31_09045) sulA 1852673..1853182 (-) 510 WP_000288710.1 SOS-induced cell division inhibitor SulA -
  KUA31_RS09050 (KUA31_09050) sxy/tfoX 1853401..1854030 (+) 630 WP_000839153.1 CRP-S regulon transcriptional coactivator Sxy Regulator
  KUA31_RS09055 (KUA31_09055) yccS 1853993..1856155 (-) 2163 WP_000875015.1 YccS family putative transporter -
  KUA31_RS09060 (KUA31_09060) yccF 1856165..1856611 (-) 447 WP_001261235.1 YccF domain-containing protein -
  KUA31_RS09065 (KUA31_09065) helD 1856734..1858788 (+) 2055 WP_001297106.1 DNA helicase IV -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 24147.02 Da        Isoelectric Point: 9.2180

>NTDB_id=630121 KUA31_RS09050 WP_000839153.1 1853401..1854030(+) (sxy/tfoX) [Escherichia coli strain OSUCMP42NDM]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=630121 KUA31_RS09050 WP_000839153.1 1853401..1854030(+) (sxy/tfoX) [Escherichia coli strain OSUCMP42NDM]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

100

100

1