Detailed information NTG0063004

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ECKY1497_RS21745
• Genome accession: NZ_AP019803
• Coordinates: 4539952..4540977 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain KY 1497
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4534952..4545977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECKY1497_RS21715 (ECKY1497_041470)	zapB	4535036..4535281 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ECKY1497_RS21720 (ECKY1497_041480)	rraA	4535366..4535851 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ECKY1497_RS21725 (ECKY1497_041490)	menA	4535944..4536870 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ECKY1497_RS21730 (ECKY1497_041500)	hslU	4536937..4538268 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ECKY1497_RS21735 (ECKY1497_041510)	hslV	4538278..4538808 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ECKY1497_RS21740 (ECKY1497_041520)	ftsN	4538901..4539860 (-)	960	WP_000068834.1	cell division protein FtsN	-
ECKY1497_RS21745 (ECKY1497_041530)	cytR	4539952..4540977 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ECKY1497_RS21750 (ECKY1497_041540)	priA	4541133..4543331 (-)	2199	WP_248520414.1	primosomal protein N'	Machinery gene
ECKY1497_RS21755 (ECKY1497_041550)	rpmE	4543534..4543746 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=63004 ECKY1497_RS21745 WP_000644904.1 4539952..4540977(-) (cytR) [Escherichia coli strain KY 1497]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=63004 ECKY1497_RS21745 WP_000644904.1 4539952..4540977(-) (cytR) [Escherichia coli strain KY 1497]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628