Detailed information NTG0630029

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N5O81_RS16210
• Genome accession: NZ_CP104503
• Coordinates: 3339392..3340417 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain E1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3334392..3345417

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5O81_RS16180 (N5O81_16180)	zapB	3334476..3334721 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
N5O81_RS16185 (N5O81_16185)	rraA	3334806..3335291 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N5O81_RS16190 (N5O81_16190)	menA	3335384..3336310 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N5O81_RS16195 (N5O81_16195)	hslU	3336377..3337708 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
N5O81_RS16200 (N5O81_16200)	hslV	3337718..3338248 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N5O81_RS16205 (N5O81_16205)	ftsN	3338341..3339300 (-)	960	WP_000068847.1	cell division protein FtsN	-
N5O81_RS16210 (N5O81_16210)	cytR	3339392..3340417 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
N5O81_RS16215 (N5O81_16215)	priA	3340573..3342771 (-)	2199	WP_001340148.1	primosomal protein N'	Machinery gene
N5O81_RS16220 (N5O81_16220)	rpmE	3342974..3343186 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
N5O81_RS16225 (N5O81_16225)	yiiX	3343247..3343855 (-)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
N5O81_RS16230 (N5O81_16230)	metJ	3343915..3344232 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=630029 N5O81_RS16210 WP_000644904.1 3339392..3340417(-) (cytR) [Escherichia coli strain E1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=630029 N5O81_RS16210 WP_000644904.1 3339392..3340417(-) (cytR) [Escherichia coli strain E1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628