Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | N596_RS06465 | Genome accession | NC_022584 |
| Coordinates | 1377233..1379662 (-) | Length | 809 a.a. |
| NCBI ID | WP_023027355.1 | Uniprot ID | - |
| Organism | Streptococcus ilei | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1372233..1384662
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N596_RS06435 (N596_06625) | - | 1372601..1373398 (-) | 798 | WP_023027350.1 | NUDIX domain-containing protein | - |
| N596_RS06440 (N596_06630) | pnuC | 1373399..1374181 (-) | 783 | WP_023027351.1 | nicotinamide riboside transporter PnuC | - |
| N596_RS06445 (N596_06635) | - | 1374194..1375252 (-) | 1059 | WP_023027352.1 | AAA family ATPase | - |
| N596_RS06450 (N596_06640) | - | 1375451..1376185 (-) | 735 | WP_023024639.1 | hypothetical protein | - |
| N596_RS06455 (N596_06645) | - | 1376348..1376752 (-) | 405 | WP_023024640.1 | DUF4430 domain-containing protein | - |
| N596_RS06460 (N596_06650) | - | 1376733..1377221 (-) | 489 | WP_023027354.1 | ECF transporter S component | - |
| N596_RS06465 (N596_06655) | clpC | 1377233..1379662 (-) | 2430 | WP_023027355.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| N596_RS06470 (N596_06660) | - | 1379670..1380128 (-) | 459 | WP_042361280.1 | CtsR family transcriptional regulator | - |
| N596_RS06475 (N596_06665) | - | 1380358..1384068 (-) | 3711 | WP_042361282.1 | alpha-L-fucosidase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89885.47 Da Isoelectric Point: 5.6893
>NTDB_id=62959 N596_RS06465 WP_023027355.1 1377233..1379662(-) (clpC) [Streptococcus ilei]
MNYSKALLETIEAAQILAGHFDSQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMNRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEDGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRSQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMARNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKKTYERHHRVHITDATIET
AVVYAHRYLTSRLLPDSAIDLLDEAAATVQNEGPQAGLQSDLTAADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKCVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLVQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SGRLNFTID
MNYSKALLETIEAAQILAGHFDSQTLDTWHILVALANNPYSVAGSVLSDYPMQIDDFQDAAEHITGQVYQRDGRYEVFPF
SFRVEEIMNRSQEIAQAVHAKSLGTEHVLLALLLERGTLASQVLEYVGFRYDDQEDGIKIVELRKSLEQRAGWDKEAVKA
IRSLYRSQQPNRQTMGNMMGMPASTSGGLEDYTRDLTEMARNGSLEPVIGRGQEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPTELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVLIEQPSVADSIAILQGLKKTYERHHRVHITDATIET
AVVYAHRYLTSRLLPDSAIDLLDEAAATVQNEGPQAGLQSDLTAADQALLKGQWKKVAQLLKEDASPKGYQLEVKEEDIL
KTLSQLSGIPVEKLTQTAAKKYLELEAELHKCVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFLFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRIFEELKKTYRPEFINRIDEKVVFHSLTSD
QMHEIVKIMVKPLVQSLAEKGITLKFQASALKWLATHGYDPEMGARPLRRTIQTQVEDYLAEILLRGEVAEGQTLKVGVK
SGRLNFTID
Nucleotide
Download Length: 2430 bp
>NTDB_id=62959 N596_RS06465 WP_023027355.1 1377233..1379662(-) (clpC) [Streptococcus ilei]
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTGGCGGGTCATTTTGATTCCCAAACCCTAGA
TACCTGGCATATCCTAGTGGCCCTAGCAAATAACCCCTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCTATGCAGA
TTGATGATTTTCAAGACGCAGCTGAGCACATCACGGGCCAAGTCTACCAACGGGATGGTCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTAGAAGAAATCATGAACCGTTCCCAAGAGATTGCCCAGGCAGTCCATGCCAAAAGTCTTGGGACAGAGCA
TGTCCTCTTGGCGCTCTTACTAGAGCGAGGAACCTTAGCTTCTCAAGTATTGGAGTATGTTGGCTTCCGCTATGATGATC
AGGAAGATGGCATTAAAATTGTCGAGCTTCGTAAGAGTTTGGAACAACGAGCAGGTTGGGACAAGGAAGCTGTCAAGGCT
ATCCGTTCTCTCTATCGGTCCCAGCAACCAAATCGTCAAACCATGGGAAATATGATGGGCATGCCGGCCTCTACTAGTGG
TGGTTTGGAAGATTATACCCGAGATCTGACAGAAATGGCTCGCAATGGCAGTTTGGAACCGGTGATTGGCCGGGGTCAAG
AGATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACAAAAAACAATCCAGTCCTCGTTGGAGATGCCGGTGTCGGAAAG
ACTGCTCTGGCTTTGGGCTTGGCTCAACGGATTGCCAGTGGAGATGTCCCAACTGAACTTGCTAAGATGCGTGTCTTAGA
GTTGGACTTGATGAATGTTGTCGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGGATGAACAACATCATCAATGATA
TTGAAGAAGATGGGCATGTCATTCTCTTCATTGATGAGCTCCATACCATTATGGGATCTGGATCAGGGATTGACTCCACC
TTGGATGCGGCCAATATCTTGAAGCCTGCCTTGGCTCGCGGGACCTTACGGACCGTAGGAGCGACTACGCAAGAAGAATA
CCAAAAACACATCGAAAAAGATGCCGCTCTGTCACGCCGTTTTGCCAAGGTTTTGATTGAGCAACCGTCTGTTGCGGATA
GCATCGCTATTTTGCAAGGGCTCAAGAAGACCTATGAGCGTCACCACCGTGTCCATATTACGGATGCAACCATTGAGACA
GCCGTTGTCTATGCCCATCGTTATTTGACCAGTCGCCTCTTGCCAGACTCAGCCATTGATCTTTTGGATGAGGCGGCAGC
GACCGTGCAAAACGAGGGGCCTCAAGCAGGCCTTCAGTCCGATTTGACAGCTGCCGATCAGGCCTTGCTCAAGGGACAGT
GGAAAAAAGTTGCTCAGTTACTAAAAGAAGACGCCAGTCCGAAAGGCTATCAGTTAGAAGTCAAGGAAGAGGATATTCTG
AAGACGCTCAGTCAGCTTTCTGGCATTCCTGTGGAGAAACTAACCCAAACAGCGGCTAAGAAATACCTTGAATTAGAAGC
GGAACTTCATAAGTGCGTGATCGGTCAGGATCAGGCTGTCTCAAGTATCAGTCGAGCGATTCGCCGCAATCAATCTGGAA
TCCGGTCTCACAAGCGACCAATTGGTTCCTTCCTCTTCCTCGGTCCGACAGGAGTCGGGAAAACCGAGCTAGCCAAGGCG
CTTGCTGAGGTCCTCTTTGATGATGAGTCCGCTTTGATTCGCTTTGATATGAGTGAATACATGGAGAAATTTGCGGCTAG
TCGACTCAACGGAGCTCCTCCGGGTTACGTTGGTTATGAAGAAGGTGGTGAGTTGACGGAAAAAGTCCGCAACAAACCTT
ATTCAGTCCTCTTGTTTGATGAGGTGGAAAAAGCCCATCCGGATATCTTTAACGTTCTCTTGCAAGTCTTGGATGACGGT
GTTTTGACCGACAGCAAGGGACGCAAGGTAGATTTCTCCAATACCATTATTATCATGACCTCAAACTTGGGAGCTACCGC
TTTACGAGATGATAAGACGGTTGGCTTTGGAGCTAAGGATATTCGCTTTGACCAGGCCAATATGGAGAAACGCATCTTTG
AAGAGTTGAAGAAGACCTATCGACCAGAGTTTATCAACCGGATTGATGAGAAGGTTGTCTTCCATAGCTTGACCAGTGAC
CAAATGCATGAGATTGTCAAGATTATGGTGAAACCGCTGGTTCAATCTCTAGCAGAGAAAGGCATTACTCTGAAATTCCA
AGCGTCTGCTCTTAAATGGCTGGCGACTCACGGATATGATCCAGAGATGGGAGCACGTCCTTTGCGCCGAACCATCCAGA
CCCAGGTGGAAGACTACTTGGCAGAGATCCTCTTGAGAGGAGAAGTGGCTGAAGGGCAAACCCTCAAGGTAGGTGTTAAG
TCTGGTCGGCTTAACTTCACGATTGACTAG
ATGAACTATTCAAAAGCCCTATTAGAAACGATTGAAGCCGCTCAAATCTTGGCGGGTCATTTTGATTCCCAAACCCTAGA
TACCTGGCATATCCTAGTGGCCCTAGCAAATAACCCCTATAGTGTAGCTGGTTCCGTCTTAAGTGACTATCCTATGCAGA
TTGATGATTTTCAAGACGCAGCTGAGCACATCACGGGCCAAGTCTACCAACGGGATGGTCGCTATGAGGTATTTCCTTTT
TCTTTCCGTGTAGAAGAAATCATGAACCGTTCCCAAGAGATTGCCCAGGCAGTCCATGCCAAAAGTCTTGGGACAGAGCA
TGTCCTCTTGGCGCTCTTACTAGAGCGAGGAACCTTAGCTTCTCAAGTATTGGAGTATGTTGGCTTCCGCTATGATGATC
AGGAAGATGGCATTAAAATTGTCGAGCTTCGTAAGAGTTTGGAACAACGAGCAGGTTGGGACAAGGAAGCTGTCAAGGCT
ATCCGTTCTCTCTATCGGTCCCAGCAACCAAATCGTCAAACCATGGGAAATATGATGGGCATGCCGGCCTCTACTAGTGG
TGGTTTGGAAGATTATACCCGAGATCTGACAGAAATGGCTCGCAATGGCAGTTTGGAACCGGTGATTGGCCGGGGTCAAG
AGATCTCGCGGATGATTCAGATTTTGAGCCGCAAAACAAAAAACAATCCAGTCCTCGTTGGAGATGCCGGTGTCGGAAAG
ACTGCTCTGGCTTTGGGCTTGGCTCAACGGATTGCCAGTGGAGATGTCCCAACTGAACTTGCTAAGATGCGTGTCTTAGA
GTTGGACTTGATGAATGTTGTCGCAGGGACTCGTTTCCGTGGGGATTTTGAAGAGCGGATGAACAACATCATCAATGATA
TTGAAGAAGATGGGCATGTCATTCTCTTCATTGATGAGCTCCATACCATTATGGGATCTGGATCAGGGATTGACTCCACC
TTGGATGCGGCCAATATCTTGAAGCCTGCCTTGGCTCGCGGGACCTTACGGACCGTAGGAGCGACTACGCAAGAAGAATA
CCAAAAACACATCGAAAAAGATGCCGCTCTGTCACGCCGTTTTGCCAAGGTTTTGATTGAGCAACCGTCTGTTGCGGATA
GCATCGCTATTTTGCAAGGGCTCAAGAAGACCTATGAGCGTCACCACCGTGTCCATATTACGGATGCAACCATTGAGACA
GCCGTTGTCTATGCCCATCGTTATTTGACCAGTCGCCTCTTGCCAGACTCAGCCATTGATCTTTTGGATGAGGCGGCAGC
GACCGTGCAAAACGAGGGGCCTCAAGCAGGCCTTCAGTCCGATTTGACAGCTGCCGATCAGGCCTTGCTCAAGGGACAGT
GGAAAAAAGTTGCTCAGTTACTAAAAGAAGACGCCAGTCCGAAAGGCTATCAGTTAGAAGTCAAGGAAGAGGATATTCTG
AAGACGCTCAGTCAGCTTTCTGGCATTCCTGTGGAGAAACTAACCCAAACAGCGGCTAAGAAATACCTTGAATTAGAAGC
GGAACTTCATAAGTGCGTGATCGGTCAGGATCAGGCTGTCTCAAGTATCAGTCGAGCGATTCGCCGCAATCAATCTGGAA
TCCGGTCTCACAAGCGACCAATTGGTTCCTTCCTCTTCCTCGGTCCGACAGGAGTCGGGAAAACCGAGCTAGCCAAGGCG
CTTGCTGAGGTCCTCTTTGATGATGAGTCCGCTTTGATTCGCTTTGATATGAGTGAATACATGGAGAAATTTGCGGCTAG
TCGACTCAACGGAGCTCCTCCGGGTTACGTTGGTTATGAAGAAGGTGGTGAGTTGACGGAAAAAGTCCGCAACAAACCTT
ATTCAGTCCTCTTGTTTGATGAGGTGGAAAAAGCCCATCCGGATATCTTTAACGTTCTCTTGCAAGTCTTGGATGACGGT
GTTTTGACCGACAGCAAGGGACGCAAGGTAGATTTCTCCAATACCATTATTATCATGACCTCAAACTTGGGAGCTACCGC
TTTACGAGATGATAAGACGGTTGGCTTTGGAGCTAAGGATATTCGCTTTGACCAGGCCAATATGGAGAAACGCATCTTTG
AAGAGTTGAAGAAGACCTATCGACCAGAGTTTATCAACCGGATTGATGAGAAGGTTGTCTTCCATAGCTTGACCAGTGAC
CAAATGCATGAGATTGTCAAGATTATGGTGAAACCGCTGGTTCAATCTCTAGCAGAGAAAGGCATTACTCTGAAATTCCA
AGCGTCTGCTCTTAAATGGCTGGCGACTCACGGATATGATCCAGAGATGGGAGCACGTCCTTTGCGCCGAACCATCCAGA
CCCAGGTGGAAGACTACTTGGCAGAGATCCTCTTGAGAGGAGAAGTGGCTGAAGGGCAAACCCTCAAGGTAGGTGTTAAG
TCTGGTCGGCTTAACTTCACGATTGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
76.391 |
100 |
0.764 |
| clpC | Streptococcus pneumoniae D39 |
76.391 |
100 |
0.764 |
| clpC | Streptococcus pneumoniae TIGR4 |
76.391 |
100 |
0.764 |
| clpC | Streptococcus mutans UA159 |
66.256 |
100 |
0.665 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.994 |
100 |
0.656 |
| clpC | Streptococcus thermophilus LMD-9 |
64.994 |
100 |
0.656 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.558 |
100 |
0.499 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.51 |
100 |
0.457 |
| clpE | Streptococcus mutans UA159 |
48.148 |
76.761 |
0.37 |
| clpE | Streptococcus pneumoniae Rx1 |
47.191 |
77.009 |
0.363 |
| clpE | Streptococcus pneumoniae D39 |
47.191 |
77.009 |
0.363 |
| clpE | Streptococcus pneumoniae R6 |
47.191 |
77.009 |
0.363 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.191 |
77.009 |
0.363 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.412 |
79.481 |
0.361 |