Detailed information NTG0062958

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: N596_RS06285
• Genome accession: NC_022584
• Coordinates: 1337121..1338482 (-)
• Length: 453 a.a.
• NCBI ID: WP_081698230.1
• Uniprot ID: -
• Organism: Streptococcus ilei
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1332121..1343482

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N596_RS06270 (N596_06445)	-	1333366..1335381 (-)	2016	WP_023027327.1	DUF2079 domain-containing protein	-
N596_RS06275 (N596_06450)	-	1335557..1336054 (-)	498	WP_023027328.1	carbonic anhydrase	-
N596_RS06280 (N596_06455)	-	1336344..1337039 (-)	696	WP_023027329.1	TIGR00266 family protein	-
N596_RS06285 (N596_06460)	radA	1337121..1338482 (-)	1362	WP_081698230.1	DNA repair protein RadA	Machinery gene
N596_RS06290 (N596_06465)	-	1338496..1339062 (-)	567	WP_042361272.1	histidine phosphatase family protein	-
N596_RS06295 (N596_06470)	-	1339013..1339459 (-)	447	WP_042361437.1	dUTP diphosphatase	-
N596_RS06300 (N596_06475)	-	1339697..1340386 (-)	690	WP_023027333.1	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 49265.73 Da
• Isoelectric Point: 6.3722

>NTDB_id=62958 N596_RS06285 WP_081698230.1 1337121..1338482(-) (radA) [Streptococcus ilei]
MAKKKTTFVCQNCAYNSPKYLGRCPNCGAWSSFVEEVEVAEVKNARVSLTGEKTKPMKLADVTSINVHRTKTEMEEFNRV
LGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVE
RIQPNFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGSRPILAEVQALVTPTVFGNAK
RTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLSVAVAIASSYKELPTNPQEAFIGEIGLTGEIR
RVTRIEQRINEAAKLGFTKIYAPKNSLQGIAIPDGIQVIAVSTVGEVLKKVFS

Nucleotide

• Length: 1362 bp

>NTDB_id=62958 N596_RS06285 WP_081698230.1 1337121..1338482(-) (radA) [Streptococcus ilei]
ATCGCAAAGAAAAAAACGACATTTGTGTGTCAAAATTGTGCTTATAATTCACCCAAATACCTAGGGCGCTGTCCTAACTG
TGGGGCCTGGTCTTCTTTTGTTGAGGAGGTCGAGGTTGCAGAGGTCAAGAATGCACGGGTATCCTTGACGGGTGAAAAGA
CCAAACCCATGAAATTGGCGGACGTGACCTCTATCAATGTTCACCGGACCAAGACGGAGATGGAGGAATTCAACCGTGTG
CTTGGAGGAGGAGTGGTGCCAGGAAGTCTAGTCCTCATCGGTGGGGATCCAGGGATCGGGAAATCAACCCTGCTCCTCCA
AGTGTCGACCCAGTTGTCTCAAGTGGGAACGGTACTCTATGTCAGCGGAGAGGAATCAGCCCAGCAGATTAAACTGCGAG
CAGAGCGCTTGGGAGATATCGACAGTGAGTTTTATCTTTATGCCGAGACCAATATGCAAAGCGTGCGAGCAGAAGTGGAG
CGCATCCAGCCTAACTTCCTCATCATTGACTCTATTCAGACCATTATGTCTCCTGAGATCTCAGGGGTGCAGGGGTCTGT
TTCTCAGGTGCGTGAGGTGACAGCTGAACTCATGCAGCTGGCTAAGACTAATAACATTGCCATCTTTATCGTAGGGCATG
TGACCAAGGAAGGGACCTTGGCAGGACCTCGGATGTTGGAACACATGGTGGATACGGTGCTCTACTTTGAGGGTGAACGC
CACCACACCTTCCGGATCCTGAGAGCGGTCAAGAACCGCTTTGGCTCCACCAATGAGATTGGGATTTTCGAGATGCAGTC
AGGCGGCCTGGTTGAGGTCCTCAATCCCAGTCAGGTCTTTCTAGAAGAACGCCTGGATGGGGCGACTGGCTCTGCCATTG
TCGTCACCATGGAAGGAAGCAGACCAATCTTGGCGGAAGTTCAGGCCTTGGTGACACCGACTGTATTTGGAAATGCCAAG
CGGACGACAACGGGTCTTGACTTTAATCGGGTCAGCCTCATTATGGCTGTGTTAGAGAAACGTTGCGGGCTCCTTCTTCA
AAATCAGGATGCCTATCTCAAGTCGGCCGGTGGTGTCAAACTGGACGAACCAGCCATTGACCTATCTGTAGCGGTGGCTA
TTGCTTCCAGCTACAAGGAGCTTCCAACCAATCCGCAAGAGGCCTTTATCGGTGAGATTGGCTTGACTGGCGAGATTCGC
CGAGTGACTCGGATCGAGCAACGGATCAATGAAGCGGCGAAACTTGGTTTCACTAAGATTTATGCACCTAAAAATTCTCT
CCAAGGGATCGCGATCCCAGACGGTATTCAAGTAATAGCAGTCTCCACGGTAGGGGAAGTTTTGAAAAAAGTCTTTTCTT
AA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (65-218)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Subunit ChlI of Mg-chelatase (ChlI) (360-425)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae Rx1	93.598	100	0.936
radA	Streptococcus pneumoniae D39	93.598	100	0.936
radA	Streptococcus pneumoniae R6	93.598	100	0.936
radA	Streptococcus pneumoniae TIGR4	93.598	100	0.936
radA	Streptococcus mitis SK321	93.598	100	0.936
radA	Streptococcus mitis NCTC 12261	93.377	100	0.934
radA	Bacillus subtilis subsp. subtilis str. 168	62.252	100	0.623