Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   LOZ87_RS14685 Genome accession   NZ_CP087391
Coordinates   3005594..3007903 (-) Length   769 a.a.
NCBI ID   WP_033574914.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ZF57     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3000594..3012903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOZ87_RS14645 (LOZ87_14645) - 3001054..3001485 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  LOZ87_RS14650 (LOZ87_14650) - 3001485..3001826 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  LOZ87_RS14655 (LOZ87_14655) - 3001819..3003300 (+) 1482 WP_033574915.1 Na+/H+ antiporter subunit D -
  LOZ87_RS14660 (LOZ87_14660) - 3003306..3003782 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  LOZ87_RS14665 (LOZ87_14665) - 3003782..3004066 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  LOZ87_RS14670 (LOZ87_14670) mnhG 3004050..3004424 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  LOZ87_RS14675 (LOZ87_14675) - 3004464..3004847 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  LOZ87_RS14680 (LOZ87_14680) comA 3004869..3005513 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  LOZ87_RS14685 (LOZ87_14685) comP 3005594..3007903 (-) 2310 WP_033574914.1 histidine kinase Regulator
  LOZ87_RS14690 (LOZ87_14690) - 3007923..3008099 (-) 177 WP_007408675.1 competence pheromone ComX -
  LOZ87_RS14695 (LOZ87_14695) comQ 3008099..3009037 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  LOZ87_RS14700 (LOZ87_14700) degQ 3009168..3009308 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  LOZ87_RS14705 (LOZ87_14705) - 3009774..3010115 (+) 342 WP_015418107.1 hypothetical protein -
  LOZ87_RS14710 (LOZ87_14710) - 3010122..3011345 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 769 a.a.        Molecular weight: 89153.57 Da        Isoelectric Point: 8.9349

>NTDB_id=629293 LOZ87_RS14685 WP_033574914.1 3005594..3007903(-) (comP) [Bacillus amyloliquefaciens strain ZF57]
MKNFIKQFTISVIILSLVYVCYVSYININGIIIGTKVIENKNKQFQVIEMSETTYGKFVGLEKGDIILKINKEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFANRLINFLYIFPIFNIILEFFRKKLPFENIITNLN
LISFFLVTLSGFVLVFYHLYKYKYSEHAYILKVLILTNTLSFAPFLLFYVAPNILTGDYIFPALASASLLVLIPFGLVYQ
FVANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWAGTNALQMNPIRQTVFIFIVMFAVFYFKEIIDFKFRLKRFSEK
FNYQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKRDNEPDWEMYSKEFKKVTSEIGKI
IELNRGFLIKIGERGGSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKL
MFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYD
LGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDG
VGCNQEKGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=629293 LOZ87_RS14685 WP_033574914.1 3005594..3007903(-) (comP) [Bacillus amyloliquefaciens strain ZF57]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTCATTATCTTAAGCCTCGTTTATGTTTGCTATGTTTCATATATAAA
CATAAATGGGATTATAATCGGGACAAAAGTTATTGAAAATAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTA
CTTACGGGAAATTCGTAGGTTTAGAAAAAGGTGACATCATTCTAAAAATCAACAAAGAAAAACCATCTGCTAAATTTTTA
AAAGGAGATAATCTTAGTCATATCAAAAGTTTAGATGTAAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCACTTGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTTTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGACCATTTAGAGGACATTCATTTAACAGGTATGTCAATTTGTTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAATCGTCTAATCAATTTCTTAT
ATATATTTCCGATTTTTAATATTATCCTGGAATTTTTCCGTAAGAAATTACCTTTTGAAAACATTATAACAAACCTTAAT
CTTATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTGTTCTATCACTTATATAAGTATAAATATTCAGAGCA
TGCTTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGCACCTAATA
TTTTAACTGGTGATTATATATTTCCAGCACTGGCATCAGCCTCATTGCTTGTCCTTATCCCATTTGGATTAGTATATCAG
TTTGTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGGTATTATACTTTACTGGCTGTAATCCCAAC
GCTAGTTATTGTCGGAGTTTTATCGGTCTGGGCGGGAACAAATGCGCTTCAAATGAATCCTATTAGACAGACTGTTTTCA
TCTTTATCGTAATGTTTGCTGTATTTTACTTTAAAGAAATAATAGATTTTAAATTTCGTTTAAAACGTTTTTCTGAAAAA
TTTAATTATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGTATAACATCTTTAAAACAAATGTTTAAAGAACT
AAAAAAGACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATC
ATGATAAAAGGGATAATGAACCTGATTGGGAAATGTATTCAAAAGAATTTAAGAAGGTTACTTCAGAGATTGGAAAAATC
ATTGAGCTAAACCGCGGTTTCTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCTCCAT
TAATACACCGAGACTGACACGGGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAACG
TGATACAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTG
ATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTT
GAAGCGCCAGTGTGAGCTGTTTCTGGCAGATTTTAAGAAAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATC
AGATGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGAT
TTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGG
CCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGA
AGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGT
GTCGGCTGCAATCAGGAAAAAGGCGGCGGCCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCT
TGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.357

100

0.756