Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LOZ87_RS05930 Genome accession   NZ_CP087391
Coordinates   1137503..1138159 (+) Length   218 a.a.
NCBI ID   WP_039062897.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ZF57     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1132503..1143159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOZ87_RS05900 (LOZ87_05900) oppF 1133032..1133949 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  LOZ87_RS05905 (LOZ87_05905) - 1134056..1135243 (+) 1188 WP_052248589.1 putative glycoside hydrolase -
  LOZ87_RS05910 (LOZ87_05910) - 1135361..1135939 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  LOZ87_RS05915 (LOZ87_05915) spx 1136118..1136513 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  LOZ87_RS05920 (LOZ87_05920) - 1136571..1137227 (-) 657 WP_007409109.1 TerC family protein -
  LOZ87_RS05930 (LOZ87_05930) mecA 1137503..1138159 (+) 657 WP_039062897.1 adaptor protein MecA Regulator
  LOZ87_RS05935 (LOZ87_05935) - 1138310..1139470 (+) 1161 WP_039062898.1 competence protein CoiA family protein -
  LOZ87_RS05940 (LOZ87_05940) pepF 1139698..1141527 (+) 1830 WP_094031915.1 oligoendopeptidase F Regulator
  LOZ87_RS05945 (LOZ87_05945) - 1141565..1141732 (-) 168 WP_003155026.1 hypothetical protein -
  LOZ87_RS05950 (LOZ87_05950) spxH 1142018..1142920 (-) 903 WP_015239573.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25892.69 Da        Isoelectric Point: 4.1309

>NTDB_id=629259 LOZ87_RS05930 WP_039062897.1 1137503..1138159(+) (mecA) [Bacillus amyloliquefaciens strain ZF57]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLGEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=629259 LOZ87_RS05930 WP_039062897.1 1137503..1138159(+) (mecA) [Bacillus amyloliquefaciens strain ZF57]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGGAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

88.991

100

0.89