Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   N597_RS01345 Genome accession   NC_022582
Coordinates   263980..264711 (+) Length   243 a.a.
NCBI ID   WP_023022277.1    Uniprot ID   -
Organism   Streptococcus ilei     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 258980..269711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N597_RS01315 (N597_01370) - 259282..260703 (+) 1422 WP_023022264.1 NCS2 family permease -
  N597_RS01320 (N597_01375) tsaE 260981..261430 (+) 450 WP_042507497.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  N597_RS01325 (N597_01380) - 261433..261966 (+) 534 WP_023022268.1 GNAT family N-acetyltransferase -
  N597_RS01330 (N597_01385) brpA 261963..263132 (+) 1170 WP_023022270.1 biofilm formation/cell division transcriptional regulator BrpA -
  N597_RS01335 (N597_01390) - 263192..263485 (-) 294 WP_023022273.1 hypothetical protein -
  N597_RS01340 (N597_01395) - 263499..263912 (-) 414 WP_023022275.1 HIT family protein -
  N597_RS01345 (N597_01400) pptA 263980..264711 (+) 732 WP_023022277.1 ABC transporter ATP-binding protein Regulator
  N597_RS01350 (N597_01405) - 264708..265763 (+) 1056 WP_023022278.1 ABC transporter permease -
  N597_RS01355 (N597_01410) ccrZ 265804..266598 (+) 795 WP_023022280.1 cell cycle regulator CcrZ -
  N597_RS01360 (N597_01415) trmB 266595..267230 (+) 636 WP_023022282.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  N597_RS01365 (N597_01420) rimP 267552..268040 (+) 489 WP_023022284.1 ribosome maturation factor RimP -
  N597_RS01370 (N597_01425) nusA 268086..269231 (+) 1146 WP_023022285.1 transcription termination factor NusA -
  N597_RS01375 (N597_01430) rnpM 269242..269538 (+) 297 WP_006596879.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26956.33 Da        Isoelectric Point: 4.7232

>NTDB_id=62892 N597_RS01345 WP_023022277.1 263980..264711(+) (pptA) [Streptococcus ilei]
MLEIKNLTGGYVNIPVLKDVSFEVGDGQLIGLIGLNGAGKSTTINEIIGLLRPYAGEIRIDGLTLAASPSAYRKKIGYIP
ETPSLYEELTLREHIETVAMAYDLDQEAVFARVTPLLKQFRLEEKLDWFPVHFSKGMKQKVMIICAFAVDPSLFIVDEPF
LGLDPVAISDLIQLLNAEKEKGKSILMSTHVLDSAEKMCDAFVILHKGQVRAQGTLEELRKEFGMADADLNEIYLALTKE
ADR

Nucleotide


Download         Length: 732 bp        

>NTDB_id=62892 N597_RS01345 WP_023022277.1 263980..264711(+) (pptA) [Streptococcus ilei]
ATGTTAGAAATAAAAAACCTGACAGGAGGCTATGTCAATATCCCTGTCTTAAAAGATGTTAGTTTTGAGGTTGGCGATGG
TCAATTGATTGGATTGATTGGCTTGAATGGAGCAGGAAAGTCAACGACCATTAATGAAATTATAGGTCTCCTGCGTCCCT
ATGCTGGTGAAATCCGGATTGATGGCTTGACTCTAGCGGCTTCTCCAAGTGCTTATCGCAAAAAAATTGGTTATATCCCA
GAAACCCCTAGCCTTTATGAAGAATTAACCTTACGTGAGCATATTGAGACAGTAGCTATGGCCTATGATTTGGATCAAGA
AGCTGTTTTTGCGCGTGTGACTCCTCTCCTGAAGCAATTTCGACTAGAGGAAAAATTGGATTGGTTTCCTGTCCATTTTT
CTAAGGGGATGAAACAAAAGGTCATGATCATTTGTGCCTTTGCTGTTGATCCAAGTTTGTTTATTGTGGATGAGCCCTTT
TTAGGCTTAGATCCAGTTGCAATCTCAGATTTAATTCAACTATTGAATGCAGAGAAAGAAAAAGGAAAATCTATTTTAAT
GAGTACCCATGTTCTGGATTCTGCTGAAAAAATGTGTGATGCCTTTGTCATCCTCCATAAGGGACAGGTCCGTGCCCAGG
GGACTTTAGAGGAATTGCGAAAAGAGTTTGGAATGGCAGATGCGGATTTGAATGAGATTTACCTTGCACTAACAAAAGAG
GCTGACCGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

98.354

0.745
  pptA Streptococcus thermophilus LMD-9

74.895

98.354

0.737

Multiple sequence alignment