Detailed information NTG0062883

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: N597_RS00725
• Genome accession: NC_022582
• Coordinates: 146663..148768 (+)
• Length: 701 a.a.
• NCBI ID: WP_023022150.1
• Uniprot ID: -
• Organism: Streptococcus ilei
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 141663..153768

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N597_RS00695 (N597_00730)	-	141863..142063 (+)	201	WP_023022147.1	hypothetical protein	-
N597_RS00700 (N597_00735)	-	142163..143164 (+)	1002	WP_023022148.1	uroporphyrinogen decarboxylase family protein	-
N597_RS00705 (N597_00740)	-	143192..144070 (+)	879	WP_023022149.1	transporter substrate-binding domain-containing protein	-
N597_RS00710 (N597_00745)	-	144137..144829 (+)	693	WP_006595038.1	amino acid ABC transporter permease	-
N597_RS00715 (N597_00750)	-	144833..145519 (+)	687	WP_006595037.1	amino acid ABC transporter permease	-
N597_RS00720 (N597_00755)	-	145539..146303 (+)	765	WP_006595036.1	amino acid ABC transporter ATP-binding protein	-
N597_RS00725 (N597_00760)	clpC	146663..148768 (+)	2106	WP_023022150.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
N597_RS00730 (N597_00765)	-	149059..149304 (+)	246	WP_023022151.1	hypothetical protein	-
N597_RS00735 (N597_00770)	yajC	149493..149822 (+)	330	WP_023022152.1	preprotein translocase subunit YajC	-
N597_RS00740 (N597_00775)	-	149954..150703 (+)	750	WP_023022153.1	isoprenyl transferase	-
N597_RS00745 (N597_00780)	-	150715..151518 (+)	804	WP_023022154.1	phosphatidate cytidylyltransferase	-
N597_RS00750 (N597_00785)	eeP	151560..152819 (+)	1260	WP_023022155.1	RIP metalloprotease RseP	Regulator

Sequence

Protein

• Length: 701 a.a.
• Molecular weight: 77610.38 Da
• Isoelectric Point: 4.7496

>NTDB_id=62883 N597_RS00725 WP_023022150.1 146663..148768(+) (clpC) [Streptococcus ilei]
MNNNFNNMDDLFNQLMGNMGGFRSESRRYMINGREVTPEEFAIYRQTGQLPTEGSEQVQHHQGKGMKQDGILAKLGRNLT
EEAREGKLDPVIGRNKEIQETSEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAGT
QYRGSFEENIQNLVNEVKEAGNIILFFDEIHQILGAGSTGDGQGSKGLADILKPALSRGELTVIGATTQDEYRNTILKNA
ALARRFNEVKVNAPSAEDTFKILQGIRELYQQHHNVVLPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAAQHPV
TDVHAVEHEIEEEKAKQEVAAAKEDYEAALNAKIRIEELEKQIANHTEDHKVTATVNDVAESVERMTGIPVSQMGATDIE
RLKDMGHRLQTKVIGQDKAVEAVAKAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLDMSEY
SDRTAVSKLIGTTAGYVGYDDNNNTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNTVIIA
TSNAGFGYEANLTEDADKPELMDRLKPFFRPEFLNRFNAVIEFSHLSKEDLSKIVDLMLAEVNKTLAKKDIDLTVTDAAK
EYMTEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDHLDAKHLLADMEDGELVIKENGTSEE

Nucleotide

• Length: 2106 bp

>NTDB_id=62883 N597_RS00725 WP_023022150.1 146663..148768(+) (clpC) [Streptococcus ilei]
ATGAATAACAACTTTAACAATATGGATGATCTTTTCAATCAACTAATGGGAAACATGGGAGGTTTTCGTTCTGAAAGCCG
TCGCTATATGATCAACGGTCGTGAAGTGACACCGGAAGAATTCGCTATTTACCGTCAAACTGGACAACTTCCAACTGAAG
GAAGCGAGCAAGTGCAACACCATCAAGGTAAAGGCATGAAACAAGATGGGATCCTTGCAAAACTTGGTCGTAACTTGACT
GAAGAAGCTCGTGAAGGAAAATTGGATCCAGTTATTGGACGTAATAAAGAAATTCAAGAAACTTCTGAAATTCTTTCTCG
CCGTACTAAGAACAATCCTGTTCTTGTTGGTGATGCTGGTGTTGGTAAAACAGCCGTTGTAGAAGGATTGGCCCAAGCTA
TCGTGAATGGGGATGTCCCAGCTGCTATCAAGAACAAAGAAATCATCTCCATTGATATTTCTGGTCTAGAAGCTGGTACA
CAATACCGTGGTAGCTTTGAAGAAAATATTCAAAACTTGGTCAACGAAGTTAAAGAAGCTGGAAACATTATCCTCTTCTT
TGACGAAATCCACCAAATCCTTGGTGCAGGTAGCACAGGGGATGGTCAAGGATCTAAAGGTCTTGCGGATATCTTGAAAC
CAGCTCTTTCACGTGGGGAATTGACCGTGATTGGGGCAACCACTCAAGATGAATACCGCAACACCATCTTGAAAAACGCA
GCTCTTGCACGTCGTTTCAACGAAGTCAAGGTTAATGCTCCATCTGCTGAAGATACCTTCAAGATCCTCCAAGGAATCCG
TGAATTGTATCAACAACACCACAATGTGGTCTTGCCTGATGAAGTCTTGAAAGCGGCAGTTGATTATTCTGTTCAATACA
TTCCACAACGTAGCTTGCCTGATAAGGCCATCGACTTGGTCGATGTGACAGCTGCTCACTTGGCAGCACAACACCCAGTG
ACAGATGTCCATGCTGTGGAACATGAAATTGAAGAAGAAAAAGCGAAACAAGAAGTTGCAGCTGCTAAAGAAGATTACGA
AGCAGCCCTTAATGCAAAAATTCGGATCGAAGAACTTGAAAAACAAATTGCAAACCATACAGAAGATCACAAGGTGACGG
CAACTGTCAATGACGTAGCAGAGTCTGTCGAACGGATGACTGGTATTCCAGTATCACAAATGGGTGCAACTGATATCGAA
CGCTTGAAAGATATGGGTCACCGTTTGCAAACCAAGGTTATTGGTCAAGACAAGGCTGTTGAAGCCGTTGCAAAAGCCAT
CCGTCGGAATCGCGCAGGCTTTGACGAAGGCAACCGTCCAATCGGTAGCTTCCTCTTCGTAGGACCTACTGGTGTCGGTA
AGACTGAGTTGGCTAAACAATTGGCCCTTGATATGTTCGGTACCAAAGATGCCATCATCCGTTTGGACATGTCAGAATAC
AGCGATCGTACAGCCGTTTCTAAGTTGATTGGTACCACTGCCGGTTATGTTGGTTACGATGATAACAATAATACTTTGAC
AGAACGTGTACGTCGCAATCCTTACTCTATCGTCCTTCTTGATGAGATTGAAAAGGCGGATCCTCAAGTGATCACTTTAC
TCCTTCAAGTCTTGGATGATGGTCGTTTGACAGATGGTCAAGGAAACACCGTTAACTTCAAGAATACGGTCATTATCGCT
ACTTCAAACGCTGGCTTTGGTTATGAGGCTAACTTGACAGAAGATGCTGACAAACCAGAACTCATGGATCGTTTGAAACC
ATTCTTCCGTCCAGAATTCCTCAACCGCTTCAATGCTGTCATCGAATTCTCACACTTGAGCAAGGAAGATCTTTCTAAGA
TTGTTGACTTGATGTTAGCAGAAGTGAACAAAACGCTTGCTAAGAAAGACATTGATTTGACAGTTACCGATGCGGCTAAA
GAATATATGACTGAAGAAGGATACGATGAAGTCATGGGTGTTCGTCCACTCCGTCGTGTGGTTGAGCAACAAATCCGTGA
TAAGGTGACAGACTTCCACTTGGATCACCTTGACGCAAAACACTTGTTGGCTGATATGGAAGATGGAGAATTGGTTATTA
AAGAGAATGGAACCTCAGAAGAATAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (114-246)

• AAA lid domain (AAA_lid_9) (255-348)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (606-676)

• AAA domain (Cdc48 subfamily) (AAA_2) (439-599)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Lactococcus lactis subsp. cremoris KW2	48.222	100	0.484
clpE	Streptococcus mutans UA159	47.727	100	0.479
clpE	Streptococcus pneumoniae Rx1	48.92	92.439	0.452
clpE	Streptococcus pneumoniae D39	48.92	92.439	0.452
clpE	Streptococcus pneumoniae R6	48.92	92.439	0.452
clpE	Streptococcus pneumoniae TIGR4	48.674	91.441	0.445
clpC	Bacillus subtilis subsp. subtilis str. 168	45.82	92.154	0.422
clpC	Streptococcus pneumoniae Rx1	42.308	92.725	0.392
clpC	Streptococcus pneumoniae D39	42.308	92.725	0.392
clpC	Streptococcus pneumoniae TIGR4	42.154	92.725	0.391
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	43.598	88.017	0.384
clpC	Streptococcus thermophilus LMD-9	42.95	88.017	0.378
clpC	Streptococcus thermophilus LMG 18311	42.536	88.873	0.378
clpC	Streptococcus mutans UA159	41.868	88.588	0.371