Detailed information NTG0628813

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LO004_RS00970
• Genome accession: NZ_CP087331
• Coordinates: 198947..200077 (-)
• Length: 376 a.a.
• NCBI ID: WP_002040490.1
• Uniprot ID: A0A241ZJN0
• Organism: Acinetobacter baumannii strain LMG994
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 193947..205077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LO004_RS00945	-	194122..194886 (-)	765	WP_000786954.1	AraC family transcriptional regulator	-
LO004_RS00950	-	194908..196122 (-)	1215	WP_000372838.1	MFS transporter	-
LO004_RS00955	-	196259..196909 (+)	651	WP_085943488.1	TetR/AcrR family transcriptional regulator	-
LO004_RS00960	-	197015..197935 (+)	921	WP_000084546.1	DMT family transporter	-
LO004_RS00965	-	198327..198896 (-)	570	WP_000633612.1	L-threonylcarbamoyladenylate synthase	-
LO004_RS00970	dprA	198947..200077 (-)	1131	WP_002040490.1	DNA-processing protein DprA	Machinery gene
LO004_RS00975	tsaP	200098..201252 (-)	1155	WP_000755282.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
LO004_RS00980	def	201375..201905 (+)	531	WP_001196539.1	peptide deformylase	-
LO004_RS00985	-	201942..202370 (+)	429	WP_000231981.1	DUF2946 family protein	-
LO004_RS00990	-	202443..204557 (+)	2115	WP_001120669.1	TonB-dependent copper receptor	-
LO004_RS00995	-	204611..204817 (+)	207	WP_000182543.1	hypothetical protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 41886.41 Da
• Isoelectric Point: 6.4547

>NTDB_id=628813 LO004_RS00970 WP_002040490.1 198947..200077(-) (dprA) [Acinetobacter baumannii strain LMG994]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVSEFQTPQGQTQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide

• Length: 1131 bp

>NTDB_id=628813 LO004_RS00970 WP_002040490.1 198947..200077(-) (dprA) [Acinetobacter baumannii strain LMG994]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTAGGGCTAC
ATGCTAATCACTTAAAACGTGTAAGCGAGTTTCAAACGCCCCAAGGTCAGACGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCAGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCACAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTACTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGTCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAACTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (87-285)

• DprA winged helix domain (DprA_WH) (328-369)

3D structure

• AlphaFold DB: A0A241ZJN0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Acinetobacter baumannii strain A118	98.138	100	0.981
dprA	Acinetobacter baumannii D1279779	97.872	100	0.979
dprA	Acinetobacter baylyi ADP1	70.604	100	0.715
dprA	Vibrio cholerae strain A1552	43.202	88.032	0.38