Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   LOZ98_RS02415 Genome accession   NZ_CP087328
Coordinates   485179..486063 (+) Length   294 a.a.
NCBI ID   WP_024437029.1    Uniprot ID   A0A009TCU6
Organism   Acinetobacter baumannii strain OC074     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 480179..491063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOZ98_RS02390 - 480578..481825 (-) 1248 WP_000893466.1 YihY family inner membrane protein -
  LOZ98_RS02395 wrbA 482113..482706 (+) 594 WP_001183361.1 NAD(P)H:quinone oxidoreductase -
  LOZ98_RS02400 - 482759..483334 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  LOZ98_RS02405 - 483407..484120 (-) 714 WP_000201548.1 DUF3108 domain-containing protein -
  LOZ98_RS02410 - 484277..484948 (-) 672 WP_001193960.1 hypothetical protein -
  LOZ98_RS02415 tonB2 485179..486063 (+) 885 WP_024437029.1 energy transducer TonB Machinery gene
  LOZ98_RS02420 ybeY 486153..486629 (-) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  LOZ98_RS02425 - 486639..487727 (-) 1089 WP_000122983.1 PhoH family protein -
  LOZ98_RS02430 miaB 487765..489216 (-) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33649.60 Da        Isoelectric Point: 9.6000

>NTDB_id=628780 LOZ98_RS02415 WP_024437029.1 485179..486063(+) (tonB2) [Acinetobacter baumannii strain OC074]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREVHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRKLKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=628780 LOZ98_RS02415 WP_024437029.1 485179..486063(+) (tonB2) [Acinetobacter baumannii strain OC074]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCCCAAGCTGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGTTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAAAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCAGAGCTTCGTATCATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009TCU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

99.32

100

0.993