Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AA2Tth_RS10445 Genome accession   NZ_AP019792
Coordinates   1923862..1924671 (-) Length   269 a.a.
NCBI ID   WP_143586891.1    Uniprot ID   -
Organism   Thermus thermophilus strain AA2-20     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1918862..1929671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AA2Tth_RS10415 (TthAA220_20360) rsmI 1919021..1919815 (-) 795 WP_143586885.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  AA2Tth_RS10420 (TthAA220_20370) - 1919817..1920314 (-) 498 WP_143586887.1 TFIIB-type zinc ribbon-containing protein -
  AA2Tth_RS10425 (TthAA220_20380) - 1920377..1920904 (-) 528 WP_011173971.1 inorganic diphosphatase -
  AA2Tth_RS10430 (TthAA220_20390) - 1920937..1921563 (+) 627 WP_011173972.1 YcxB family protein -
  AA2Tth_RS10435 (TthAA220_20400) comEA 1921536..1921844 (+) 309 WP_024119555.1 helix-hairpin-helix domain-containing protein Machinery gene
  AA2Tth_RS10440 (TthAA220_20410) comA/comEC 1921841..1923874 (+) 2034 WP_143586889.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  AA2Tth_RS10445 (TthAA220_20420) spo0J 1923862..1924671 (-) 810 WP_143586891.1 ParB/RepB/Spo0J family partition protein Regulator
  AA2Tth_RS10450 (TthAA220_20430) soj 1924655..1925404 (-) 750 WP_011173976.1 chromosome-partitioning ATPase Soj -
  AA2Tth_RS10455 (TthAA220_20440) rsmG 1925398..1926147 (-) 750 WP_143586893.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  AA2Tth_RS10460 (TthAA220_20450) mnmG 1926147..1927940 (-) 1794 WP_143586895.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29862.74 Da        Isoelectric Point: 9.9869

>NTDB_id=62818 AA2Tth_RS10445 WP_143586891.1 1923862..1924671(-) (spo0J) [Thermus thermophilus strain AA2-20]
MSRKPSGLGRGLEALLPKTGAGVVRLPLTSIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRPQGDGYELVAGERR
YRAALMAGLQEVPAVVKDLTDREALELALVENLQREDLSPVEEARGYQALLEMGLTQEEVARRVGKARSTVANALRLLQL
PPEALEALEREEITAGHARALLMLEPEDRLWGLKEILEKGLSVRQAEALRERLAMAPKRPAEPSPLSLELSRHLGLPVRV
VGGKKGKVVIQYRSLEELEALLRRLGYQA

Nucleotide


Download         Length: 810 bp        

>NTDB_id=62818 AA2Tth_RS10445 WP_143586891.1 1923862..1924671(-) (spo0J) [Thermus thermophilus strain AA2-20]
GTGTCCAGGAAGCCTAGCGGTCTCGGGCGGGGCCTCGAGGCCCTGCTCCCCAAGACGGGGGCGGGGGTGGTCCGCCTGCC
CCTCACCAGCATCCGCCCCAACCCCCGCCAGCCGCGGAAGCGGTTCGCCGAGGAGAGCCTCAAGGAGCTCGCCGACTCCA
TCCGGGAGAAGGGCCTCCTCCAACCCCTCCTCGTCCGGCCCCAGGGGGACGGGTACGAGCTCGTGGCGGGGGAAAGGCGC
TACCGGGCCGCCCTCATGGCAGGGCTTCAGGAGGTCCCCGCCGTGGTCAAGGACCTCACGGACCGGGAGGCCTTGGAGCT
CGCCCTGGTGGAGAACCTTCAGCGGGAGGACCTCTCCCCCGTGGAGGAGGCCCGGGGCTACCAGGCCCTTTTGGAGATGG
GCCTCACCCAGGAGGAGGTGGCCCGGCGGGTGGGCAAGGCCCGCTCCACCGTGGCCAACGCCCTCAGGCTCCTCCAGCTT
CCCCCCGAGGCCCTCGAGGCCCTGGAGCGGGAGGAGATCACCGCGGGCCACGCCCGGGCCCTCCTCATGCTGGAGCCCGA
GGACCGGCTCTGGGGGCTTAAGGAGATCCTGGAGAAGGGGCTTTCCGTGCGGCAGGCGGAGGCCCTTAGGGAGCGCCTGG
CCATGGCCCCTAAGCGCCCCGCTGAGCCCTCCCCCCTCTCCCTGGAACTCTCCCGCCACCTGGGCCTGCCCGTGAGGGTG
GTGGGGGGGAAGAAGGGCAAGGTGGTGATCCAGTACCGCTCCTTGGAGGAGCTGGAGGCCCTTCTGCGGCGCCTCGGCTA
CCAGGCGTAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(162-210)

ParB/Sulfiredoxin domain (ParB_N)

(26-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.2

92.937

0.383

Multiple sequence alignment