Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LOY68_RS29885 Genome accession   NZ_CP087205
Coordinates   6657977..6658381 (-) Length   134 a.a.
NCBI ID   WP_008152601.1    Uniprot ID   -
Organism   Pseudomonas sp. B21-053     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6652977..6663381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOY68_RS29870 (LOY68_29845) - 6654774..6656831 (-) 2058 WP_163910969.1 methyl-accepting chemotaxis protein -
  LOY68_RS29875 (LOY68_29850) - 6656989..6657543 (-) 555 WP_054044395.1 chemotaxis protein CheW -
  LOY68_RS29880 (LOY68_29855) pilH 6657554..6657919 (-) 366 WP_007897961.1 twitching motility response regulator PilH -
  LOY68_RS29885 (LOY68_29860) pilG 6657977..6658381 (-) 405 WP_008152601.1 twitching motility response regulator PilG Regulator
  LOY68_RS29890 (LOY68_29865) gshB 6658607..6659560 (+) 954 WP_054044396.1 glutathione synthase -
  LOY68_RS29895 (LOY68_29870) - 6659638..6660537 (+) 900 WP_265041393.1 energy transducer TonB -
  LOY68_RS29900 (LOY68_29875) - 6660673..6661245 (+) 573 WP_265041394.1 YqgE/AlgH family protein -
  LOY68_RS29905 (LOY68_29880) ruvX 6661245..6661682 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  LOY68_RS29910 (LOY68_29885) pyrR 6661764..6662270 (+) 507 WP_054044401.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LOY68_RS29915 (LOY68_29890) - 6662297..6663301 (+) 1005 WP_007897943.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14589.99 Da        Isoelectric Point: 7.2441

>NTDB_id=628134 LOY68_RS29885 WP_008152601.1 6657977..6658381(-) (pilG) [Pseudomonas sp. B21-053]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=628134 LOY68_RS29885 WP_008152601.1 6657977..6658381(-) (pilG) [Pseudomonas sp. B21-053]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGATGATTCGAAGACGATCCGCCGCACCGCCGAAACGCTGTT
GAAAAACGTAGGCTGTGAAGTCATCACGGCCATCGATGGTTTCGATGCGCTGGCCAAGATTGCCGACAATCACCCGGGCA
TTATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709