Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LOY67_RS26355 Genome accession   NZ_CP087203
Coordinates   6018882..6019310 (-) Length   142 a.a.
NCBI ID   WP_265065077.1    Uniprot ID   -
Organism   Pseudomonas sp. B21-056     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6013882..6024310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOY67_RS26340 (LOY67_26315) - 6015728..6017782 (-) 2055 WP_265065075.1 methyl-accepting chemotaxis protein -
  LOY67_RS26345 (LOY67_26320) - 6017918..6018457 (-) 540 WP_265065076.1 chemotaxis protein CheW -
  LOY67_RS26350 (LOY67_26325) pilH 6018468..6018833 (-) 366 WP_024778880.1 twitching motility response regulator PilH -
  LOY67_RS26355 (LOY67_26330) pilG 6018882..6019310 (-) 429 WP_265065077.1 response regulator Regulator
  LOY67_RS26360 (LOY67_26335) gshB 6019533..6020486 (+) 954 WP_139640867.1 glutathione synthase -
  LOY67_RS26365 (LOY67_26340) - 6020563..6021459 (+) 897 WP_265065078.1 energy transducer TonB -
  LOY67_RS26370 (LOY67_26345) - 6021644..6022213 (+) 570 WP_265065079.1 YqgE/AlgH family protein -
  LOY67_RS26375 (LOY67_26350) ruvX 6022213..6022650 (+) 438 WP_265065080.1 Holliday junction resolvase RuvX -
  LOY67_RS26380 (LOY67_26355) pyrR 6022733..6023239 (+) 507 WP_265065081.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LOY67_RS26385 (LOY67_26360) - 6023264..6024268 (+) 1005 WP_003177495.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15505.95 Da        Isoelectric Point: 7.4360

>NTDB_id=628075 LOY67_RS26355 WP_265065077.1 6018882..6019310(-) (pilG) [Pseudomonas sp. B21-056]
MAEHLTQQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAVDGFDALAKITDHHPGIIFVDIMMPRLDGYQTCALIKN
NSAFKATPVILLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFAAVQPHQAH

Nucleotide


Download         Length: 429 bp        

>NTDB_id=628075 LOY67_RS26355 WP_265065077.1 6018882..6019310(-) (pilG) [Pseudomonas sp. B21-056]
ATGGCAGAGCATCTTACGCAGCAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATTCGCCGTAC
CGCCGAAACCTTGCTGCGCAACGTCGGTTGCGAGGTGATCACGGCGGTCGACGGCTTCGATGCCCTGGCCAAGATTACCG
ATCATCATCCGGGCATCATCTTTGTCGACATCATGATGCCGCGTCTGGACGGTTACCAGACCTGCGCCCTGATCAAGAAC
AACAGCGCCTTCAAGGCCACGCCGGTGATCCTGCTGTCGTCCCGGGACGGACTGTTCGACAAGGCCAAGGGGCGCATCGT
CGGTTCCGATCAGTTTTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATACAAGCTCATGTTCCGGGCTTTG
CCGCCGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.271

83.099

0.634