Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LOY34_RS01965 Genome accession   NZ_CP087199
Coordinates   438100..438510 (+) Length   136 a.a.
NCBI ID   WP_045193849.1    Uniprot ID   A0A423DY69
Organism   Pseudomonas sp. B21-009     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 433100..443510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOY34_RS01935 (LOY34_01935) - 433396..433965 (-) 570 WP_045193852.1 YqgE/AlgH family protein -
  LOY34_RS01940 (LOY34_01940) - 434037..435020 (-) 984 WP_093376935.1 ankyrin repeat domain-containing protein -
  LOY34_RS01945 (LOY34_01945) - 435182..435676 (-) 495 WP_195885506.1 hypothetical protein -
  LOY34_RS01950 (LOY34_01950) - 435817..436722 (-) 906 WP_038997538.1 energy transducer TonB -
  LOY34_RS01955 (LOY34_01955) gshB 436832..437785 (-) 954 WP_195885507.1 glutathione synthase -
  LOY34_RS01960 (LOY34_01960) - 437784..438062 (+) 279 WP_258664222.1 hypothetical protein -
  LOY34_RS01965 (LOY34_01965) pilG 438100..438510 (+) 411 WP_045193849.1 twitching motility response regulator PilG Regulator
  LOY34_RS01970 (LOY34_01970) pilH 438554..438919 (+) 366 WP_045193983.1 twitching motility response regulator PilH -
  LOY34_RS01975 (LOY34_01975) - 438916..439470 (+) 555 WP_082075373.1 chemotaxis protein CheW -
  LOY34_RS01980 (LOY34_01980) - 439486..441531 (+) 2046 WP_195885509.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14877.19 Da        Isoelectric Point: 5.1866

>NTDB_id=627949 LOY34_RS01965 WP_045193849.1 438100..438510(+) (pilG) [Pseudomonas sp. B21-009]
MEQPGAALKVMVIDDSKTIRRTAQILLGEAGCEVITAIDGFDALAKIIDHQPQIIFVDVLMPRLDGYQTCALIKQNSTFK
DTPVILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIKAHVPGFAAEEQHAP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=627949 LOY34_RS01965 WP_045193849.1 438100..438510(+) (pilG) [Pseudomonas sp. B21-009]
ATGGAACAGCCCGGCGCGGCATTGAAGGTGATGGTGATCGACGACTCCAAGACGATTCGCCGCACCGCCCAGATATTGCT
CGGTGAAGCAGGATGTGAGGTCATCACGGCCATCGACGGTTTTGATGCCCTGGCCAAGATCATCGACCACCAGCCGCAGA
TCATTTTCGTCGACGTGCTGATGCCGCGTCTGGACGGCTACCAGACCTGCGCCCTGATCAAGCAGAACAGCACCTTCAAG
GACACGCCGGTGATTCTCCTGTCGTCCCGCGATGGCCTGTTCGACAAGGCCCGTGGCCGTGTCGTCGGCTCTGATCAATT
TTTGACCAAACCTTTCAGCAAGGAAGAGCTGCTGGACGCAATCAAGGCCCATGTGCCCGGATTCGCCGCAGAAGAACAAC
ACGCACCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A423DY69

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.8

91.912

0.632