Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   N4Q44_RS05535 Genome accession   NZ_CP104295
Coordinates   1168897..1169838 (+) Length   313 a.a.
NCBI ID   WP_071210743.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain DETAB-C9     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1163897..1174838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N4Q44_RS05525 (N4Q44_05525) basA 1164318..1166165 (+) 1848 WP_071210745.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  N4Q44_RS05530 (N4Q44_05530) basB 1166236..1168266 (-) 2031 WP_139160625.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  N4Q44_RS05535 (N4Q44_05535) ceuB 1168897..1169838 (+) 942 WP_071210743.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  N4Q44_RS05540 (N4Q44_05540) bauC 1169838..1170785 (+) 948 WP_071210742.1 ferric acinetobactin ABC transporter permease subunit BauC -
  N4Q44_RS05545 (N4Q44_05545) bauE 1170782..1171552 (+) 771 WP_071210741.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  N4Q44_RS05550 (N4Q44_05550) bauB 1171559..1172527 (+) 969 WP_001104135.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33981.09 Da        Isoelectric Point: 8.6926

>NTDB_id=627870 N4Q44_RS05535 WP_071210743.1 1168897..1169838(+) (ceuB) [Acinetobacter baumannii strain DETAB-C9]
MRFGLFCIFIILCICSLLLGAEPIQWTTLFSFSQESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=627870 N4Q44_RS05535 WP_071210743.1 1168897..1169838(+) (ceuB) [Acinetobacter baumannii strain DETAB-C9]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCAGGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATCACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTAATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCATTATGAAGTCATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACATCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGCCGCTCGATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419