Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LOY31_RS27290 Genome accession   NZ_CP087192
Coordinates   6057240..6057644 (-) Length   134 a.a.
NCBI ID   WP_007953330.1    Uniprot ID   Q3K5A9
Organism   Pseudomonas sp. B21-021     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6052240..6062644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOY31_RS27275 (LOY31_27255) - 6054190..6056250 (-) 2061 WP_115079501.1 methyl-accepting chemotaxis protein -
  LOY31_RS27280 (LOY31_27260) - 6056264..6056803 (-) 540 WP_007953327.1 chemotaxis protein CheW -
  LOY31_RS27285 (LOY31_27265) pilH 6056814..6057179 (-) 366 WP_007953328.1 twitching motility response regulator PilH -
  LOY31_RS27290 (LOY31_27270) pilG 6057240..6057644 (-) 405 WP_007953330.1 twitching motility response regulator PilG Regulator
  LOY31_RS27295 (LOY31_27275) gshB 6057870..6058820 (+) 951 WP_007953331.1 glutathione synthase -
  LOY31_RS27300 (LOY31_27280) - 6058928..6059827 (+) 900 WP_011336367.1 energy transducer TonB -
  LOY31_RS27305 (LOY31_27285) - 6059887..6060459 (+) 573 WP_221535387.1 YqgE/AlgH family protein -
  LOY31_RS27310 (LOY31_27290) ruvX 6060459..6060896 (+) 438 WP_007953334.1 Holliday junction resolvase RuvX -
  LOY31_RS27315 (LOY31_27295) pyrR 6060978..6061481 (+) 504 WP_085646969.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LOY31_RS27320 (LOY31_27300) - 6061509..6062513 (+) 1005 WP_007913665.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14532.86 Da        Isoelectric Point: 6.7107

>NTDB_id=627772 LOY31_RS27290 WP_007953330.1 6057240..6057644(-) (pilG) [Pseudomonas sp. B21-021]
MEQQSSALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNNAFK
GTPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAISAHVPGFAAALPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=627772 LOY31_RS27290 WP_007953330.1 6057240..6057644(-) (pilG) [Pseudomonas sp. B21-021]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAGACCCTGTT
GAAAAATGCAGGGTGCGAAGTCATCACCGCGATCGACGGTTTTGACGCCCTGGCGAAGATCGCCGACCACCACCCCGGGA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAATGCGTTCAAG
GGCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAACCTTTCAGCAAGGAAGAACTGCTCGACGCGATTTCGGCCCATGTTCCGGGCTTCGCTGCCGCTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q3K5A9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694