Detailed information NTG0062752

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EC110512_RS24175
• Genome accession: NZ_AP019761
• Coordinates: 4735187..4736212 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O111:H- strain 110512
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4730187..4741212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EC110512_RS24145 (EC110512_C46000)	zapB	4730271..4730516 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
EC110512_RS24150 (EC110512_C46010)	rraA	4730601..4731086 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EC110512_RS24155 (EC110512_C46020)	menA	4731179..4732105 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EC110512_RS24160 (EC110512_C46030)	hslU	4732172..4733503 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EC110512_RS24165 (EC110512_C46040)	hslV	4733513..4734043 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EC110512_RS24170 (EC110512_C46050)	ftsN	4734136..4735095 (-)	960	WP_000068830.1	cell division protein FtsN	-
EC110512_RS24175 (EC110512_C46060)	cytR	4735187..4736212 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EC110512_RS24180 (EC110512_C46070)	priA	4736368..4738566 (-)	2199	WP_001341957.1	primosomal protein N'	Machinery gene
EC110512_RS24185 (EC110512_C46080)	rpmE	4738769..4738981 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=62752 EC110512_RS24175 WP_000644904.1 4735187..4736212(-) (cytR) [Escherichia coli O111:H- strain 110512]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=62752 EC110512_RS24175 WP_000644904.1 4735187..4736212(-) (cytR) [Escherichia coli O111:H- strain 110512]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628