Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LOY43_RS26685 Genome accession   NZ_CP087175
Coordinates   5983742..5984146 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas sp. B21-041     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5978742..5989146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOY43_RS26670 (LOY43_26635) - 5980564..5982612 (-) 2049 WP_258708937.1 methyl-accepting chemotaxis protein -
  LOY43_RS26675 (LOY43_26640) - 5982767..5983306 (-) 540 WP_095049470.1 chemotaxis protein CheW -
  LOY43_RS26680 (LOY43_26645) pilH 5983317..5983682 (-) 366 WP_026000666.1 twitching motility response regulator PilH -
  LOY43_RS26685 (LOY43_26650) pilG 5983742..5984146 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  LOY43_RS26690 (LOY43_26655) gshB 5984372..5985343 (+) 972 WP_007913671.1 glutathione synthase -
  LOY43_RS26695 (LOY43_26660) - 5985451..5986350 (+) 900 WP_093429840.1 energy transducer TonB -
  LOY43_RS26700 (LOY43_26665) - 5986427..5986999 (+) 573 WP_095049468.1 YqgE/AlgH family protein -
  LOY43_RS26705 (LOY43_26670) ruvX 5986999..5987436 (+) 438 WP_064589634.1 Holliday junction resolvase RuvX -
  LOY43_RS26710 (LOY43_26675) pyrR 5987517..5988023 (+) 507 WP_034153653.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LOY43_RS26715 (LOY43_26680) - 5988051..5989055 (+) 1005 WP_007913665.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=627339 LOY43_RS26685 WP_007913673.1 5983742..5984146(-) (pilG) [Pseudomonas sp. B21-041]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=627339 LOY43_RS26685 WP_007913673.1 5983742..5984146(-) (pilG) [Pseudomonas sp. B21-041]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACATTGTT
GAAGAATGTCGGTTGCGAAGTGATCACGGCGATCGACGGTTTCGACGCTCTGGCGAAGATCGCCGACAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGCGCGTTCAAG
GCCACACCGGTGATCATGCTGTCATCGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATTCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701