Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   BN854_RS02110 Genome accession   NC_022538
Coordinates   437100..438890 (+) Length   596 a.a.
NCBI ID   WP_026656995.1    Uniprot ID   U4KK36
Organism   Alteracholeplasma palmae J233     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 432100..443890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BN854_RS02080 (BN85404070) rsgA 432277..433230 (+) 954 WP_026656956.1 ribosome small subunit-dependent GTPase A -
  BN854_RS02085 (BN85404080) rpe 433326..433964 (+) 639 WP_026656963.1 ribulose-phosphate 3-epimerase -
  BN854_RS02090 (BN85404090) - 433952..434557 (+) 606 WP_026656970.1 thiamine diphosphokinase -
  BN854_RS02095 (BN85404100) rpmB 434578..434766 (-) 189 WP_026656977.1 50S ribosomal protein L28 -
  BN854_RS02100 (BN85404110) - 435096..436751 (+) 1656 WP_026656986.1 DAK2 domain-containing protein -
  BN854_RS02110 (BN85404120) rcrP 437100..438890 (+) 1791 WP_026656995.1 ABC transporter ATP-binding protein Regulator
  BN854_RS02115 (BN85404130) rcrQ 438883..440664 (+) 1782 WP_026656997.1 ABC transporter ATP-binding protein Regulator
  BN854_RS02120 (BN85404140) - 440778..441326 (+) 549 WP_026656998.1 DUF402 domain-containing protein -
  BN854_RS02125 (BN85404150) - 441323..442294 (+) 972 WP_026656999.1 aromatic acid exporter family protein -
  BN854_RS02135 (BN85404160) - 442508..443650 (+) 1143 WP_026657000.1 site-2 protease family protein -

Sequence

Protein


Download         Length: 596 a.a.        Molecular weight: 66232.80 Da        Isoelectric Point: 6.8906

>NTDB_id=62707 BN854_RS02110 WP_026656995.1 437100..438890(+) (rcrP) [Alteracholeplasma palmae J233]
MLRVLKEVKLRDWITILVSIGFITLQVWLELTIPDYMNNIIKEINKGQGNGSIGSIWQNGGLMLALTLASLLASVVTGYI
AARVAANVSMNIRGAVFNKVESFSMDEISKFSTPSLITRTTNDVTQVQMLFTMGLQVFFKAPITAIWAISKIYGKNYASL
TILVGSIIAFLIVFVLVIVLAVLPKFKKVQALTDNLNNVTRENLTGLRVVRAYNAEDYEEEKFNQANDKLMKNYLFTNTF
LSFINPVLIVAINFLSLGIYYLGAHIINGMPGETIGDFVGRGNTLADIMVFMSYAMQVVMSFLMLVMILFILPRAIVSSK
RIKEILDTDNKIKDGGLTALDGKDLGTVEFRNVSFKYPDAEEYVLENINFKANRGDTIAFIGSTGSGKSTLINLIPRFYD
ITEGEVLVNGNDVRDYKVNELRNMLGYVPQKGVLFSGSVKENINFGENGFIGNVDEQLDKALEIAQAKSFVDKMDDKVDS
HIAQGGKNVSGGQKQRLSIARAVYKNPLIYIFDDSFSALDYKTDKILRKELSLKTDHATSLIVAQRIGTIKNANQIIVLE
EGKVVGQGTHNELMKTCEVYQEIAYSQLSKEELSND

Nucleotide


Download         Length: 1791 bp        

>NTDB_id=62707 BN854_RS02110 WP_026656995.1 437100..438890(+) (rcrP) [Alteracholeplasma palmae J233]
ATGCTAAGAGTACTTAAAGAAGTTAAACTTAGAGATTGGATAACTATCCTAGTCAGTATAGGATTCATTACTCTTCAAGT
TTGGTTAGAATTAACAATTCCTGACTATATGAATAATATTATTAAAGAAATTAATAAAGGTCAAGGAAACGGAAGTATTG
GATCAATTTGGCAAAACGGAGGGTTAATGTTGGCATTAACACTTGCGAGCTTACTTGCCTCAGTTGTTACTGGATATATT
GCTGCTAGAGTCGCAGCTAATGTTTCTATGAATATTAGAGGTGCAGTCTTTAATAAAGTAGAGTCATTTTCTATGGACGA
GATATCTAAATTTTCAACACCGAGCTTAATTACTAGAACAACAAACGATGTTACCCAAGTTCAAATGTTGTTTACAATGG
GACTTCAAGTATTCTTTAAAGCACCTATTACTGCTATTTGGGCAATTAGTAAGATATATGGAAAAAATTATGCTAGTCTT
ACAATTTTAGTAGGATCAATTATTGCATTCTTAATAGTATTCGTATTAGTAATTGTGTTAGCAGTATTGCCTAAATTTAA
GAAAGTTCAAGCATTAACTGATAACTTAAACAATGTTACAAGAGAAAACTTGACAGGATTAAGAGTAGTTAGGGCATATA
ATGCTGAGGATTATGAAGAAGAAAAATTTAATCAAGCAAATGATAAACTAATGAAAAATTACCTATTCACAAATACTTTT
TTATCGTTTATTAATCCTGTTTTAATTGTTGCAATCAATTTCTTATCACTAGGTATTTATTACTTAGGTGCTCATATCAT
TAATGGTATGCCAGGCGAAACCATTGGAGATTTTGTTGGTAGAGGAAATACACTAGCAGATATTATGGTCTTTATGTCTT
ATGCAATGCAAGTAGTTATGTCATTCTTAATGCTTGTTATGATTTTATTTATTTTACCTAGAGCAATCGTTTCTTCTAAG
CGTATTAAAGAAATATTAGATACTGATAATAAAATAAAAGATGGTGGTTTAACTGCTTTAGATGGAAAAGATTTAGGAAC
AGTAGAGTTTAGAAATGTAAGTTTTAAATATCCGGATGCGGAAGAATATGTCTTAGAAAACATTAACTTTAAAGCTAATC
GTGGTGATACGATTGCCTTTATTGGTTCTACAGGATCAGGAAAATCAACTTTAATTAACTTAATCCCTAGATTTTATGAT
ATTACCGAAGGTGAAGTATTAGTTAATGGTAATGATGTTAGAGACTATAAAGTTAATGAACTTAGAAACATGTTAGGCTA
TGTACCACAAAAAGGTGTTTTATTTAGTGGAAGTGTAAAAGAAAATATTAACTTTGGAGAAAATGGATTTATTGGTAATG
TAGATGAACAACTAGATAAAGCACTTGAAATAGCACAAGCTAAATCATTTGTTGATAAGATGGATGATAAAGTTGATTCA
CACATCGCACAAGGCGGTAAGAACGTCTCTGGTGGACAAAAACAAAGACTATCTATTGCAAGAGCGGTATACAAAAATCC
TCTTATTTACATATTTGATGACTCTTTTTCAGCTTTGGACTATAAAACAGATAAAATTTTAAGAAAAGAATTAAGTTTGA
AAACTGATCATGCAACATCTTTAATAGTTGCACAACGTATTGGTACAATTAAAAATGCTAACCAAATCATTGTTTTAGAA
GAAGGAAAAGTAGTAGGACAAGGAACTCATAATGAATTAATGAAAACTTGTGAAGTATATCAAGAAATCGCCTATTCACA
ATTATCAAAGGAGGAATTAAGCAATGACTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(365-515)

ABC transporter transmembrane region (ABC_membrane)

(17-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U4KK36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

48.675

100

0.493

Multiple sequence alignment