Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   N1207_RS21985 Genome accession   NZ_CP104097
Coordinates   4214660..4215454 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain GL-4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4209660..4220454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N1207_RS21960 (N1207_21960) rocD 4210234..4211439 (-) 1206 WP_041850283.1 ornithine aminotransferase -
  N1207_RS21965 (N1207_21965) rocR 4211680..4213065 (+) 1386 WP_041850282.1 arginine utilization regulatory protein RocR -
  N1207_RS21970 (N1207_21970) - 4213047..4213208 (-) 162 Protein_4286 ATP-binding protein -
  N1207_RS21975 (N1207_21975) - 4213227..4213356 (-) 130 Protein_4287 hypothetical protein -
  N1207_RS21980 (N1207_21980) htrA 4213376..4214578 (-) 1203 WP_041850281.1 serine protease HtrC Regulator
  N1207_RS21985 (N1207_21985) vicX 4214660..4215454 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  N1207_RS21990 (N1207_21990) walI 4215476..4216318 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  N1207_RS21995 (N1207_21995) walH 4216305..4217672 (-) 1368 WP_041850604.1 WalRK two-component regulatory system regulator WalH -
  N1207_RS22000 (N1207_22000) walK 4217662..4219497 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  N1207_RS22005 (N1207_22005) walR 4219505..4220212 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=627059 N1207_RS21985 WP_003226939.1 4214660..4215454(-) (vicX) [Bacillus subtilis strain GL-4]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=627059 N1207_RS21985 WP_003226939.1 4214660..4215454(-) (vicX) [Bacillus subtilis strain GL-4]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTGCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTTGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53