Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | N1207_RS20020 | Genome accession | NZ_CP104097 |
| Coordinates | 3828802..3829935 (-) | Length | 377 a.a. |
| NCBI ID | WP_003227715.1 | Uniprot ID | P70962 |
| Organism | Bacillus subtilis strain GL-4 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3823802..3834935
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1207_RS19980 (N1207_19980) | ywnA | 3823936..3824337 (-) | 402 | WP_003227734.1 | Rrf2 family transcriptional regulator | - |
| N1207_RS19985 (N1207_19985) | ureC | 3824472..3826181 (-) | 1710 | WP_015714862.1 | urease subunit alpha | - |
| N1207_RS19990 (N1207_19990) | ureB | 3826178..3826552 (-) | 375 | WP_041850426.1 | urease subunit beta | - |
| N1207_RS19995 (N1207_19995) | ureA | 3826549..3826866 (-) | 318 | WP_003227724.1 | urease subunit gamma | - |
| N1207_RS20000 (N1207_20000) | - | 3827061..3827219 (-) | 159 | WP_120363539.1 | hypothetical protein | - |
| N1207_RS20005 (N1207_20005) | - | 3827423..3827686 (-) | 264 | WP_231573524.1 | ABC transporter | - |
| N1207_RS20010 (N1207_20010) | csbD | 3827907..3828095 (-) | 189 | WP_015251021.1 | stress response protein CsbD | - |
| N1207_RS20015 (N1207_20015) | - | 3828168..3828647 (-) | 480 | WP_003244390.1 | hypothetical protein | - |
| N1207_RS20020 (N1207_20020) | rapC | 3828802..3829935 (-) | 1134 | WP_003227715.1 | response regulator aspartate phosphatase RapB | Regulator |
| N1207_RS20025 (N1207_20025) | moaA | 3830127..3831152 (-) | 1026 | WP_043940213.1 | GTP 3',8-cyclase MoaA | - |
| N1207_RS20030 (N1207_20030) | fdhD | 3831168..3831956 (-) | 789 | WP_003227709.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| N1207_RS20035 (N1207_20035) | - | 3832189..3832350 (-) | 162 | WP_003227706.1 | hypothetical protein | - |
| N1207_RS20040 (N1207_20040) | ywmD | 3832445..3833119 (-) | 675 | WP_003243553.1 | VWA domain-containing protein | - |
| N1207_RS20045 (N1207_20045) | - | 3833172..3833312 (-) | 141 | WP_003227702.1 | hypothetical protein | - |
| N1207_RS20050 (N1207_20050) | ywmC | 3833443..3834126 (-) | 684 | WP_003227700.1 | VWA domain-containing protein | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 45037.17 Da Isoelectric Point: 4.8005
>NTDB_id=627049 N1207_RS20020 WP_003227715.1 3828802..3829935(-) (rapC) [Bacillus subtilis strain GL-4]
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
MAAYEIPSSQVGVKINKWYKHILAFQVADAVKLKEEIDLDIEQMEEDQLLLLYYQLISYRHQIMLDYVKPDLHEESQLQY
RELIKTLESNQDSISGLSEYYFHLFRGMYEFEQNNYISAISFYRKAEKMLAFVEDEIERAEFHFKVAEVFYIMKQTHFSM
NHAVQALETYKAHDFYRVRRIQCHFVISGNYIDYRNYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQA
AEYFEKALPVFEDYQLEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQALYVESVNLNMIQE
VFDYMEEKGLYVYIEEFALDAASYFSHREQYKEAVYFYEKAVSMREMIQRNDCLYEV
Nucleotide
Download Length: 1134 bp
>NTDB_id=627049 N1207_RS20020 WP_003227715.1 3828802..3829935(-) (rapC) [Bacillus subtilis strain GL-4]
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCTGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
ATGGCCGCGTACGAGATCCCGTCATCTCAAGTAGGAGTGAAAATCAATAAGTGGTATAAGCACATTTTAGCATTTCAAGT
GGCTGATGCCGTAAAGCTGAAAGAAGAAATTGATCTAGATATCGAACAGATGGAAGAGGATCAGCTGCTTCTCCTGTATT
ATCAGCTGATCAGCTACCGGCACCAAATTATGCTGGATTATGTAAAGCCTGACCTGCACGAGGAATCTCAGCTTCAATAT
CGTGAATTGATCAAAACGCTGGAAAGCAATCAGGACAGCATCTCCGGATTATCTGAGTATTATTTTCACTTGTTTAGAGG
AATGTACGAATTTGAACAGAACAATTACATCTCGGCTATATCCTTTTATCGGAAAGCTGAGAAGATGCTTGCGTTTGTAG
AAGATGAAATTGAAAGAGCGGAATTTCATTTTAAAGTGGCGGAAGTCTTTTATATTATGAAGCAGACGCACTTTTCCATG
AACCATGCTGTACAGGCGCTGGAGACGTATAAGGCTCACGATTTTTACAGAGTCAGAAGAATTCAATGCCATTTCGTCAT
ATCAGGAAACTACATTGACTACAGAAATTATGAAAAAGCGCTTGAACATTTAGATGACGCGTATCGCCTTGCTTTATTGG
AAGGACAGCCCCGTTTGATCGGATCAGCCCTTTATAATATTGGTAATTGCTATGATGACAAGGGGGAGCTGGATCAGGCC
GCCGAATACTTTGAAAAAGCGCTTCCTGTCTTCGAGGATTATCAGCTGGAACAGCTTCCAAAAGCGCTCTTCAGCCTGAC
TCGCGTTCTTTTCAAAAAACAAGATAGCGAAGCCGCGATACGGTACTATGAAAAAGGGATTGCCATTGCCCAAAAACGAA
ACGACTTCTTCAGTCTGGCAAAATATAAATTTCTGCAGGCATTATATGTGGAATCTGTCAATTTGAATATGATTCAAGAA
GTATTTGATTATATGGAAGAAAAGGGCCTGTATGTATATATTGAAGAATTTGCTTTAGATGCTGCCTCTTATTTCAGTCA
TCGCGAACAATATAAAGAAGCGGTGTATTTTTATGAAAAAGCGGTCAGCATGAGAGAGATGATTCAAAGGAACGATTGTT
TATATGAAGTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
42.632 |
100 |
0.43 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
42.667 |
99.469 |
0.424 |