Detailed information NTG0626976

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N1207_RS08940
• Genome accession: NZ_CP104097
• Coordinates: 1698934..1699923 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain GL-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1693934..1704923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N1207_RS08925 (N1207_08925)	acpP	1694131..1694364 (+)	234	WP_003154310.1	acyl carrier protein	-
N1207_RS08930 (N1207_08930)	rncS	1694504..1695253 (+)	750	WP_003232030.1	ribonuclease III	-
N1207_RS08935 (N1207_08935)	smc	1695354..1698914 (+)	3561	WP_128472225.1	chromosome segregation protein SMC	-
N1207_RS08940 (N1207_08940)	pilA	1698934..1699923 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
N1207_RS08945 (N1207_08945)	sivC	1699960..1700445 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
N1207_RS08950 (N1207_08950)	srpM	1700622..1700954 (+)	333	WP_003238590.1	putative DNA-binding protein	-
N1207_RS08955 (N1207_08955)	ffh	1700968..1702308 (+)	1341	WP_014113771.1	signal recognition particle protein	-
N1207_RS08960 (N1207_08960)	rpsP	1702414..1702686 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
N1207_RS08965 (N1207_08965)	khpA	1702686..1702931 (+)	246	WP_041850835.1	KH domain-containing protein	-
N1207_RS08970 (N1207_08970)	ylqD	1703053..1703439 (+)	387	WP_014476793.1	YlqD family protein	-
N1207_RS08975 (N1207_08975)	rimM	1703444..1703968 (+)	525	WP_041850834.1	ribosome maturation factor RimM	-
N1207_RS08980 (N1207_08980)	trmD	1703965..1704696 (+)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=626976 N1207_RS08940 WP_003232026.1 1698934..1699923(+) (pilA) [Bacillus subtilis strain GL-4]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=626976 N1207_RS08940 WP_003232026.1 1698934..1699923(+) (pilA) [Bacillus subtilis strain GL-4]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAACTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCCCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTCAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401