Detailed information NTG0626932

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: N1207_RS02810
• Genome accession: NZ_CP104097
• Coordinates: 537570..538745 (+)
• Length: 391 a.a.
• NCBI ID: WP_243572542.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain GL-4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 532570..543745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N1207_RS02790 (N1207_02790)	cwlT	533961..534950 (+)	990	WP_032730587.1	bifunctional lytic transglycosylase/C40 family peptidase	-
N1207_RS02795 (N1207_02795)	-	534965..535471 (+)	507	WP_220555873.1	hypothetical protein	-
N1207_RS02800 (N1207_02800)	conJ	535534..535914 (+)	381	WP_260197045.1	DUF4467 domain-containing protein	-
N1207_RS02805 (N1207_02805)	-	536035..537348 (+)	1314	WP_260196903.1	hypothetical protein	-
N1207_RS02810 (N1207_02810)	rapF	537570..538745 (+)	1176	WP_243572542.1	Rap family tetratricopeptide repeat protein	Regulator
N1207_RS02815 (N1207_02815)	-	539152..540072 (-)	921	Protein_506	tyrosine-type recombinase/integrase	-
N1207_RS02820 (N1207_02820)	-	540031..540324 (+)	294	WP_231573529.1	cystatin-like fold lipoprotein	-
N1207_RS02825 (N1207_02825)	-	540418..542967 (-)	2550	WP_041850728.1	DEAD/DEAH box helicase	-
N1207_RS02830 (N1207_02830)	-	543262..543441 (+)	180	WP_041850729.1	hypothetical protein	-
N1207_RS22360	-	543448..543661 (+)	214	Protein_510	transcriptional regulator	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 46459.62 Da
• Isoelectric Point: 4.8443

>NTDB_id=626932 N1207_RS02810 WP_243572542.1 537570..538745(+) (rapF) [Bacillus subtilis strain GL-4]
MRGVFLDKDKIPYDIVTKKLNDWYTSIKNDQVEQAEIIKTEVEKELLNMEENQDALLYYQLLDFRHEIMLSYMNSKEIED
LHNAYETIKEIEKQGQLTGMLEYYFYFFKGMYEFRRKELTTAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFREYEEYAVQTLRCQFIVAGNYIDSLEYEKALQVFFESLEIAKEINIDHLIGMSHINIGICFDELEEY
TKASRHLELSLEYLEKCNNSFVSKALFILTHVKAKQKNFNLAFEYFKKGKMYSNKNNDNEYAAKFKILEGLYFSNGEYHH
IEDAFTYLESKKMYADVENYAIEVGDYFHQTGDLVLSNQYYRLSIEARQKIKKGEIINENHSDSVGSAGIE

Nucleotide

• Length: 1176 bp

>NTDB_id=626932 N1207_RS02810 WP_243572542.1 537570..538745(+) (rapF) [Bacillus subtilis strain GL-4]
TTGCGGGGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACATAGTCACAAAAAAATTAAATGATTGGTATACATCAAT
AAAAAATGATCAAGTTGAGCAAGCAGAGATTATAAAAACAGAAGTAGAGAAAGAATTGCTAAACATGGAAGAAAACCAAG
ATGCCTTGTTATATTATCAGCTATTAGATTTTAGGCATGAGATAATGCTGAGTTATATGAATTCTAAGGAAATAGAAGAT
CTCCATAATGCCTATGAAACTATAAAAGAAATTGAGAAACAAGGGCAATTAACTGGCATGTTGGAATACTATTTTTACTT
TTTTAAGGGTATGTACGAGTTTAGACGTAAAGAATTAACTACAGCGATAAGTGCCTATCGAATAGCAGAATCAAAGTTGT
CGGAAGTTGAGGACGAAATAGAAAAAGCAGAGTTTTTTTTCAAAGTGTCCTATGTGTATTATTACATGAAACAAACGTAT
TTCTCCATGAATTATGCAAATCGTGCGCTAAAAATATTTAGAGAGTATGAGGAATATGCTGTTCAAACGTTACGCTGTCA
ATTCATTGTTGCCGGAAATTATATTGATTCATTAGAATATGAGAAGGCATTACAAGTTTTTTTTGAATCATTGGAGATAG
CAAAAGAAATAAATATTGATCATTTAATTGGAATGTCCCATATAAATATCGGTATATGTTTTGATGAATTGGAGGAATAT
ACAAAGGCATCTCGTCACTTGGAATTGTCTTTAGAGTATTTAGAAAAATGCAATAATTCTTTTGTGTCGAAAGCTCTATT
TATTTTGACACATGTCAAAGCAAAACAGAAGAACTTTAATTTGGCTTTTGAATATTTTAAGAAAGGGAAAATGTACAGTA
ATAAAAATAATGATAATGAATACGCGGCGAAATTCAAAATATTAGAAGGACTTTACTTTTCAAATGGTGAATATCATCAT
ATTGAAGATGCTTTTACTTATCTAGAATCAAAAAAAATGTATGCTGATGTTGAGAATTACGCCATAGAAGTTGGGGATTA
CTTTCACCAAACGGGCGATTTGGTGCTTTCAAACCAATATTATCGTTTAAGCATTGAAGCCAGACAAAAAATAAAAAAAG
GAGAGATTATCAATGAAAATCACTCGGACTCTGTTGGCAGTGCTGGTATTGAGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	39.286	93.095	0.366
rapC	Bacillus subtilis subsp. subtilis str. 168	37.666	96.419	0.363