Detailed information NTG0062692

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BAPNAU_RS17805
• Genome accession: NC_022530
• Coordinates: 3654125..3655288 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis NAU-B3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3649125..3660288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAPNAU_RS17775 (BAPNAU_3456)	-	3649390..3649809 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
BAPNAU_RS17780	comFC	3649883..3650572 (-)	690	WP_197538213.1	ComF family protein	Machinery gene
BAPNAU_RS17785 (BAPNAU_3458)	-	3650578..3650862 (-)	285	WP_022553866.1	competence protein ComFB	-
BAPNAU_RS17790 (BAPNAU_3459)	comFA	3650920..3652305 (-)	1386	WP_022553867.1	DEAD/DEAH box helicase	Machinery gene
BAPNAU_RS17795 (BAPNAU_3460)	-	3652413..3653261 (-)	849	WP_003151387.1	DegV family protein	-
BAPNAU_RS17800 (BAPNAU_3461)	degU	3653359..3654048 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BAPNAU_RS17805 (BAPNAU_3462)	degS	3654125..3655288 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
BAPNAU_RS17810 (BAPNAU_3463)	-	3655511..3656158 (+)	648	WP_007407485.1	YigZ family protein	-
BAPNAU_RS17815 (BAPNAU_3464)	-	3656163..3657377 (+)	1215	WP_022553868.1	LCP family protein	-
BAPNAU_RS17820 (BAPNAU_3465)	-	3657477..3658553 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
BAPNAU_RS17825 (BAPNAU_3466)	-	3658685..3659881 (-)	1197	WP_022553869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=62692 BAPNAU_RS17805 WP_007407484.1 3654125..3655288(-) (degS) [Bacillus velezensis NAU-B3]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=62692 BAPNAU_RS17805 WP_007407484.1 3654125..3655288(-) (degS) [Bacillus velezensis NAU-B3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTTAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCTGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951