Detailed information NTG0626773

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: N2A94_RS10470
• Genome accession: NZ_CP104048
• Coordinates: 2006324..2006761 (-)
• Length: 145 a.a.
• NCBI ID: WP_003102915.1
• Uniprot ID: A0ABN0IPC0
• Organism: Streptococcus parauberis strain KSP20
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2001324..2011761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N2A94_RS10440 (N2A94_10440)	-	2002107..2002760 (-)	654	WP_013794395.1	CPBP family intramembrane glutamic endopeptidase	-
N2A94_RS10445 (N2A94_10445)	-	2002769..2003221 (-)	453	WP_003108634.1	hypothetical protein	-
N2A94_RS10450 (N2A94_10450)	-	2003214..2003426 (-)	213	WP_003108636.1	helix-turn-helix transcriptional regulator	-
N2A94_RS10455 (N2A94_10455)	-	2003537..2004730 (-)	1194	WP_003108638.1	acetate kinase	-
N2A94_RS10460 (N2A94_10460)	comGH	2004786..2005742 (-)	957	WP_003103712.1	class I SAM-dependent methyltransferase	Machinery gene
N2A94_RS10465 (N2A94_10465)	comGG	2005849..2006346 (-)	498	WP_003108640.1	competence type IV pilus minor pilin ComGG	-
N2A94_RS10470 (N2A94_10470)	comGF/cglF	2006324..2006761 (-)	438	WP_003102915.1	competence type IV pilus minor pilin ComGF	Machinery gene
N2A94_RS10475 (N2A94_10475)	comGE	2006739..2007038 (-)	300	WP_259966510.1	competence type IV pilus minor pilin ComGE	Machinery gene
N2A94_RS10480 (N2A94_10480)	comGD	2007010..2007453 (-)	444	WP_307877782.1	competence type IV pilus minor pilin ComGD	Machinery gene
N2A94_RS10485 (N2A94_10485)	comGC	2007407..2007727 (-)	321	WP_013794397.1	competence type IV pilus major pilin ComGC	Machinery gene
N2A94_RS10490 (N2A94_10490)	-	2008380..2009105 (-)	726	WP_013794398.1	peptidoglycan amidohydrolase family protein	-
N2A94_RS10495 (N2A94_10495)	-	2009098..2009562 (-)	465	WP_013794399.1	phage holin family protein	-
N2A94_RS10500 (N2A94_10500)	-	2009566..2009715 (-)	150	WP_259966511.1	hypothetical protein	-
N2A94_RS10505 (N2A94_10505)	-	2009778..2010116 (-)	339	WP_013794400.1	DUF1366 domain-containing protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16538.25 Da
• Isoelectric Point: 9.7525

>NTDB_id=626773 N2A94_RS10470 WP_003102915.1 2006324..2006761(-) (comGF/cglF) [Streptococcus parauberis strain KSP20]
MLQKLVTKGFTLFEALIALLVISGSLLVYQGLTKSTFANMNYLSQSDQDSWLLFANQFRAELEGSQFIEIKGKKMLVKKD
EKVVSFRLTEKNDFRKSAASGKGLNPMLLNLQDIQMTTVNHQLTLHLIWQSGLERDFIYAFEKPS

Nucleotide

• Length: 438 bp

>NTDB_id=626773 N2A94_RS10470 WP_003102915.1 2006324..2006761(-) (comGF/cglF) [Streptococcus parauberis strain KSP20]
ATGTTACAAAAATTAGTGACTAAGGGTTTTACCTTATTTGAAGCCTTAATTGCACTTTTAGTTATCTCTGGATCTCTACT
GGTTTATCAAGGTTTAACTAAGTCAACGTTTGCCAATATGAACTATCTAAGTCAAAGTGATCAAGATAGTTGGCTCTTAT
TTGCAAATCAGTTTAGAGCTGAATTGGAAGGTTCACAATTTATTGAAATTAAAGGAAAAAAAATGCTTGTTAAAAAGGAT
GAAAAGGTAGTTTCTTTTAGATTAACTGAAAAAAATGACTTTAGAAAATCGGCAGCTAGTGGGAAAGGCTTAAATCCAAT
GTTGTTAAACTTACAGGATATTCAAATGACGACAGTAAATCACCAACTAACTCTTCATTTGATCTGGCAAAGTGGCCTGG
AAAGGGATTTTATCTATGCATTTGAGAAGCCAAGTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (41-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis SK321	44.928	95.172	0.428
comGF/cglF	Streptococcus mitis NCTC 12261	43.796	94.483	0.414
comGF	Streptococcus mutans UA140	42.029	95.172	0.4
comGF	Streptococcus mutans UA159	41.304	95.172	0.393
comGF/cglF	Streptococcus pneumoniae R6	40.58	95.172	0.386
comGF/cglF	Streptococcus pneumoniae TIGR4	40.58	95.172	0.386
comGF/cglF	Streptococcus pneumoniae D39	40.58	95.172	0.386
comGF/cglF	Streptococcus pneumoniae Rx1	40.58	95.172	0.386